Gene Information

Name : EKO11_0693 (EKO11_0693)
Accession : YP_005276410.1
Strain : Escherichia coli KO11FL
Genome accession: NC_016902
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 721518 - 722177 bp
Length : 660 bp
Strand : -
Note : KEGG: eok:G2583_3746 DNA-binding response regulator in two-component regulatory system with QseC; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence : 
ATGCGAATTTTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGT
CGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCGCCTTATGATGCGGTGATCCTGGATTTAACCT
TACCAGGCATGGATGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCG
CGCGATGCGCTGGAGGAACGTGTAGAAGGGCTGCGTCTGGGAGCTGACGATTATCTGTGTAAACCTTTTGCGTTGATAGA
AGTCGCCGCCAGGCTGGAAGCTCTGATGCGCCGAACCAACGGCCAGGCCAGCAACGAGCTGCGCCACGGTAACGTCATGC
TCGACCCCGGCAAACGTATCGCCACGCTGGCTGGCGAACCCTTAACACTGAAACCAAAAGAATTTGCCCTGCTGGAATTA
CTGATGCGTAACGCTGGTCGGGTACTGCCGCGCAAACTGATTGAAGAGAAACTGTATACCTGGGACGAAGAGGTCACCAG
TAATGCCGTTGAAGTGCATGTGCATCATCTGCGACGCAAACTCGGTAGTGATTTTATTCGTACCGTGCATGGTATTGGCT
ACACATTAGGTGAGAAATGA

Protein sequence : 
MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAPYDAVILDLTLPGMDGRDILREWREKGQREPVLILTA
RDALEERVEGLRLGADDYLCKPFALIEVAARLEALMRRTNGQASNELRHGNVMLDPGKRIATLAGEPLTLKPKEFALLEL
LMRNAGRVLPRKLIEEKLYTWDEEVTSNAVEVHVHHLRRKLGSDFIRTVHGIGYTLGEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-40 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EKO11_0693 YP_005276410.1 two component transcriptional regulator, winged helix family BAC0487 Protein 2e-40 44
EKO11_0693 YP_005276410.1 two component transcriptional regulator, winged helix family BAC0638 Protein 3e-31 44
EKO11_0693 YP_005276410.1 two component transcriptional regulator, winged helix family BAC0083 Protein 5e-37 43
EKO11_0693 YP_005276410.1 two component transcriptional regulator, winged helix family BAC0347 Protein 4e-34 43
EKO11_0693 YP_005276410.1 two component transcriptional regulator, winged helix family NC_002516.2.879194.p Protein 4e-31 41
EKO11_0693 YP_005276410.1 two component transcriptional regulator, winged helix family BAC0308 Protein 2e-36 41
EKO11_0693 YP_005276410.1 two component transcriptional regulator, winged helix family BAC0197 Protein 6e-36 41
EKO11_0693 YP_005276410.1 two component transcriptional regulator, winged helix family BAC0111 Protein 1e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EKO11_0693 YP_005276410.1 two component transcriptional regulator, winged helix family VFG0473 Protein 2e-40 47
EKO11_0693 YP_005276410.1 two component transcriptional regulator, winged helix family VFG1390 Protein 3e-32 42