Gene Information

Name : EKO11_0481 (EKO11_0481)
Accession : YP_005276201.1
Strain : Escherichia coli KO11FL
Genome accession: NC_016902
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 502665 - 503594 bp
Length : 930 bp
Strand : -
Note : PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbo:SBO_3144 putative DNA-binding transcriptional regulator

DNA sequence :
ATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGTAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACA
GATGAGCGTTTCGTCCATCAGTCAGACGGTGTCAAAACTGGAAGATGAGTTGCAGGTAAAGCTGTTAAACCGTAGTACAC
GCAGCATTGGTCTGACTGAAGCCGGCAGAATTTACTACCAGGGCTGCCGTCGGATGCTCCATGAAGTGCAGGATGTTCAT
GAGCAACTGTATGCCTTCAATAACACCCCCATCGGGACGCTGCGCATTGGCTGTTCTTCAACTATGGCACAAAATGTTCT
CGCCGGGCTGACAGCAAAAATGCTGAAAGAATACCCAGGTTTGAGCGTCAATCTGGTTACCGGAATTCCTGCCCCCGACC
TGATTGCCGATGGTCTGGATGTGGTAATCCGCGTCGGCGCGTTGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCG
ATGCCGATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCA
TTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCC
CACAAGGAAGATTTGTGACTAATGATCCGATGACGCTGGTGCGCTGGCTGACGGCGGGTGCCGGGATCGCCTACGTGCCG
CTGATGTGGGTGATCAACGAGATCAATCGTGGGGAGCTGGAGATCCTGCTGCCGCGTTACCAGTCAGATCCACGCCCGGT
TTATGCGTTGTATACCGAAAAAGATAAACTGCCGCTGAAGGTACAGGTCGTGATCAACTCGCTGACGGATTATTTTGTTG
AGGTCGGTAAATTGTTTCAGGAGATGCATGGGCGCGGGAAAGAGAAGTAA

Protein sequence :
MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVSKLEDELQVKLLNRSTRSIGLTEAGRIYYQGCRRMLHEVQDVH
EQLYAFNNTPIGTLRIGCSSTMAQNVLAGLTAKMLKEYPGLSVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGA
MPMVVCAAKSYLTQYGIPEKPADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRFVTNDPMTLVRWLTAGAGIAYVP
LMWVINEINRGELEILLPRYQSDPRPVYALYTEKDKLPLKVQVVINSLTDYFVEVGKLFQEMHGRGKEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcaR1 CAI77370.1 putative lysR-family transcriptional regulator Not tested tc-PAIYe Protein 2e-121 83