Gene Information

Name : EKO11_4034 (EKO11_4034)
Accession : YP_005279667.1
Strain : Escherichia coli KO11FL
Genome accession: NC_016902
Putative virulence/resistance : Virulence
Product : regulatory protein DeoR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4244903 - 4245586 bp
Length : 684 bp
Strand : -
Note : KEGG: pwa:Pecwa_1387 regulatory protein DeoR

DNA sequence : 
ATGAAAACACAGCATGATTATCATGACCGCCTGTCTGTCAGGCTATCAGTCATTATCAGCCGCTTACTGGCTGGTGAATC
TCTGGAGCTTAAAGTATTAGCTGATGAATTTGGTGTCTCAGAACGCACCCTACAGCGGGATTTTCAGCAACGCCTGATCC
ATCTGGATCTTGAGCATCGCAGCGGAAGTTACCGACTTATCCGCCAAACAGGCCGGGAGCACTTACCCAATACATTTGCG
TTTATACGTAATTCAGGAATTTCAGGAATCATTCCGGCTCAGAACCGCAAGTTGATCCGGTTGATTGCCAGCAATTCCGG
CGTATCGCCGTGTCTTATTGGGCATGGGGCATTATCTTCTCCCGTCACGCAGACTGCCTGTTTTCTGGAACTGGCGGAAG
CTATCCGCGACTACCGCGCCGTTACATTATTAGTTAACGGTAAAAGCTACGAAGCAGTAGCTCCCCGCCGTCTGATATTT
CAGTCCAAAAACTGGTTTCTTGTTGCTACCCGCACCAGAAATTTACAGGTGTTTCGGATGGAAGACGTTAACGCCGTAAC
CGTTCTGGATACCTCTTTTCGCAGAAAGCCTGAACTTGATGCTCTGACTGCCAGTGAAGAGTTCATTTCAGCCCTCCCTC
ACTTTCGTTTCATAAGTGACGTAATTCAGACCTTCAGAGAGTAA

Protein sequence : 
MKTQHDYHDRLSVRLSVIISRLLAGESLELKVLADEFGVSERTLQRDFQQRLIHLDLEHRSGSYRLIRQTGREHLPNTFA
FIRNSGISGIIPAQNRKLIRLIASNSGVSPCLIGHGALSSPVTQTACFLELAEAIRDYRAVTLLVNGKSYEAVAPRRLIF
QSKNWFLVATRTRNLQVFRMEDVNAVTVLDTSFRRKPELDALTASEEFISALPHFRFISDVIQTFRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5160 NP_757008.1 transcriptional regulator YfjR Not tested PAI II CFT073 Protein 1e-49 48
APECO1_3492 YP_854319.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 1e-49 48
yfjR AAZ04453.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 9e-50 48
unnamed CAD42094.1 hypothetical protein Not tested PAI II 536 Protein 6e-50 48
unnamed CAD33782.1 hypothetical protein Not tested PAI I 536 Protein 3e-50 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EKO11_4034 YP_005279667.1 regulatory protein DeoR VFG1613 Protein 3e-50 48
EKO11_4034 YP_005279667.1 regulatory protein DeoR VFG1523 Protein 2e-50 48