Gene Information

Name : EKO11_4028 (EKO11_4028)
Accession : YP_005279661.1
Strain : Escherichia coli KO11FL
Genome accession: NC_016902
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4239303 - 4240121 bp
Length : 819 bp
Strand : -
Note : KEGG: pay:PAU_03958 hypothetical protein

DNA sequence :
ATGAAATTAGCCAGCCGCTTTGGTCGCGTAAATCAAATCCGTCGCGATCGCCCATTAACGCATGACGAATTGATGCAGTA
TGTCCCCAGCGTATTCGGGGAAAATAAGCACGAATCACGCAGCGAACGCTATACCTATATTCCCACCATTACCCTGCTCG
ATAACCTCCAGCGTGAAGGATTTCATCCTTTCTTTGCCTGCCAGACCCGCGTTCGTGATGTGGGTAAACGTGAGCATACA
AAACACATGCTGCGTCTGCGCCGGGAAGACCAGATCAATCGCAACCAGGTGCCGGAAATTATTCTGCTCAACAGCCATGA
TGGTTCCAGTTCTTATCAGATGCTGCCAGGGCTGTTTCGTTCTGTTTGTTGTAACGGACTGGTCTGCGGCGAGTCGTTTG
GTGAAGTACGGGTACCGCATAAAGGCAATGTGGTGGAGAAAGTGATTGAAGGCGCTTATGAAGTCCTCAGTGTTTTTGAC
CAGGTTGAAGAGAAACGCGATGCCATGCAGTCGCTGATGCTGCCTCCCCCTGCGCAACAGGCGCTGGCAAAGGCGGCGCT
GACGTACCGCTTTGGCGAAGAGCACCAGCCAGTGACGGAATCCCAGTTGCTGGCTCCCCGCCGCTGGCAGGATGAATCCG
ACGATCTGTGGACGACCTACCAGCGAATTCAGGAGAACCTGATCAAAGGTGGTTTAAACGGGCGGACGGCAAAAGGTGGT
CGCACGCACACCCGCGCCATTAAAGGCATCGACGGCGATGTCAGGCTCAACCGCGCCCTGTGGGTGATGGCTGAAAACAT
GTTGCAACTGGCCTCATAA

Protein sequence :
MKLASRFGRVNQIRRDRPLTHDELMQYVPSVFGENKHESRSERYTYIPTITLLDNLQREGFHPFFACQTRVRDVGKREHT
KHMLRLRREDQINRNQVPEIILLNSHDGSSSYQMLPGLFRSVCCNGLVCGESFGEVRVPHKGNVVEKVIEGAYEVLSVFD
QVEEKRDAMQSLMLPPPAQQALAKAALTYRFGEEHQPVTESQLLAPRRWQDESDDLWTTYQRIQENLIKGGLNGRTAKGG
RTHTRAIKGIDGDVRLNRALWVMAENMLQLAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 4e-92 75
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-92 75
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 8e-93 74
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 3e-94 74
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 8e-93 74
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 3e-94 74
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 3e-94 74
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 9e-95 74
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 9e-95 74
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 2e-95 74
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-92 74
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 7e-94 73
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 7e-95 73
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 1e-94 72
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 5e-91 72
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 3e-74 58
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 4e-75 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EKO11_4028 YP_005279661.1 hypothetical protein VFG0658 Protein 3e-93 74
EKO11_4028 YP_005279661.1 hypothetical protein VFG1526 Protein 1e-95 74
EKO11_4028 YP_005279661.1 hypothetical protein VFG1615 Protein 4e-95 73
EKO11_4028 YP_005279661.1 hypothetical protein VFG1676 Protein 3e-91 72