Gene Information

Name : EKO11_3976 (EKO11_3976)
Accession : YP_005279610.1
Strain : Escherichia coli KO11FL
Genome accession: NC_016902
Putative virulence/resistance : Unknown
Product : transposase YhgA family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4180499 - 4181443 bp
Length : 945 bp
Strand : -
Note : PFAM: transposase YhgA family protein; KEGG: eoj:ECO26_5535 hypothetical protein

DNA sequence :
ATGACAAACTTCACAACCAGCACGCCGCATGACGCATTATTTAAATCCTTTCTCACGCACCCTGACACCGCGCGGGATTT
TATGGAGATCCACTTACCCAAAGATTTACGTGAACTGTGCGATCTCGACAGCTTAAAACTGGAATCCGCCAGCTTCGTCG
ATGAAAAATTGCGGGCGCTACACTCCGATATTCTGTGGTCGGTAAAGACCCGTGAAGGTGATGGTTATATTTACGTAGTG
ATTGAACATCAGAGCCGCGAGGATATCCATATGGCCTTTCGCCTGATGCGATATTCCATGGCGGTGATGCAGCGCCATAT
CGAGCATGATAAACGCCGGCCGCTACCGCTGGTCATCCCGATGCTGTTTTATCACGGTAGCCGTAGTCCTTATCCCTGGT
CCCTGTGCTGGCTGGACGAATTTGCTGACCCGACCACCGCACGGAAGCTTTATACCGCAGCGTTCCCGCTGGTGGATGTC
ACTGTCGTGCCAGACGACGAGATTGTGCAGCACCGCAGAGTCGCCCTGTTGGAGTTGATCCAAAAGCATATTCGCCAGCG
CGATCTGATGGGGCTTATCGATCAACTGGTAATATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGT
TAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAAGAAGTTTATCAGCGAACTTACCCGTCGAATGCCACAACAC
AGGGAGCGAATAATGACGATTGCAGAGCGAATTTATAATGATGGATGGCTGTTGGGGATGGAAAAGGGGAAAGAAGAAGG
GGAACAACGCCTCCTTAGATTGTTGTTGCAGAATGGGGCAGATCCTGAATGGATACAAAAGATTACCGGACTTTCGACAG
AGCAAATGCAGGCATTAGAGCAGCCCTTGCCTGAAATCAAGCGCGATCCATGGATCGAATACTAA

Protein sequence :
MTNFTTSTPHDALFKSFLTHPDTARDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRALHSDILWSVKTREGDGYIYVV
IEHQSREDIHMAFRLMRYSMAVMQRHIEHDKRRPLPLVIPMLFYHGSRSPYPWSLCWLDEFADPTTARKLYTAAFPLVDV
TVVPDDEIVQHRRVALLELIQKHIRQRDLMGLIDQLVILLVTECANDSQITALLNYILLTGDEARFKKFISELTRRMPQH
RERIMTIAERIYNDGWLLGMEKGKEEGEQRLLRLLLQNGADPEWIQKITGLSTEQMQALEQPLPEIKRDPWIEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3497 YP_001007658.1 putative transposase Not tested YAPI Protein 4e-74 58
YpsIP31758_3726 YP_001402680.1 transposase Not tested YAPI Protein 2e-75 58
pilW CAF28495.1 putative transposase Not tested YAPI Protein 2e-75 58
tnp AAN64216.1 transposase Not tested necrotizing factor locus Protein 1e-69 57
PMI2627 YP_002152329.1 transposase Not tested Not named Protein 6e-59 49