Gene Information

Name : EKO11_3694 (EKO11_3694)
Accession : YP_005279331.1
Strain : Escherichia coli KO11FL
Genome accession: NC_016902
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3856111 - 3857193 bp
Length : 1083 bp
Strand : +
Note : KEGG: eoh:ECO103_0223 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305

DNA sequence :
ATGGACGGAAAGAATCGGGCAGCATCCTCTTATCTGAGTCCGGGAAATCCCCCGGCAGATAAAGAGCAGAATGATCCGCT
GGCACAGGTTTTCCATAATGCCTGCTCTTACAATTTTTTTGCGATGGCGGAGCTGTTGCACCGCCTGGCAAAGGGTGAAA
AGGGGACGCCAGAATTATCCCTGCGTGACGATCCGGCACAGGAAACCCTGCGTTTCAGCGCCGATGCCAGCCTTGCCTTC
CCGTGCAGTGATATCAGTGCGCTGAAACGGGATACATCAGGGGCATTCAGGATGACCACCACCTTTATGGGGTTACAGGG
GAGCCAGTCGCCTCTCCCCGGTTATTACCTCGATCACCTGGCCTGGAAAGCGGTACATGAACAAAGTCCGGTAGGTGATT
TTCTGGATATGTTCAGCCACCGCCTGACCCAGTTTGTCTGGCATATCTGGCGTAAGTACCGCTATCACATCAGTTTTCGT
AACGGCGGTGTGGATGCGTTCTCGCAGCGCATGTACTCCCTTGTCGGGCTGGGCCACCGCCAGCTTCGCGATAAGCTGGC
GATTAATCACAGCAAAATGCTGGCGTATTCCGGGATCCTGGCAAATCCGGGACGATCCCCGGAAATAATCTGTGGCCTGG
TGTCCCACTGCTTTGATTTGTCAGAAGTGACGCTGCAAAACTGGCAACGTCGCAAGGTGGATATTGAACCGGATCAGCAA
AATAGTCTGGGGAGCTATTCTCTTAAAAATGGCGAAAAACTGGCGGGAAGATCGGTACTGGGCAACTTTGTTCTGGGTAC
ACGAGTGCCCGATCTCAGCGGAAAATTCCAGCTCAGTATTACCAGCCTGACCCGAAAACAGTTCCTCTCTTTTCTGCCGT
CCGGCGAAAACTTCCTGCCACTGACGATGTTCGTGTCCTTCATCCTGCGCGATCAGCTTGCCTGGGACTTACATCTGGGG
CTGGCGCCGGAGCAGGTGGGCGCAATGCGCCTGGGCGATAACAAAAGTGCGCTGCTGGGCTGGACCAGCTTCCTCGGCAC
ACCGGAAGAACGACCCTCAGTCACCATCAGGGTACGGTCGTAA

Protein sequence :
MDGKNRAASSYLSPGNPPADKEQNDPLAQVFHNACSYNFFAMAELLHRLAKGEKGTPELSLRDDPAQETLRFSADASLAF
PCSDISALKRDTSGAFRMTTTFMGLQGSQSPLPGYYLDHLAWKAVHEQSPVGDFLDMFSHRLTQFVWHIWRKYRYHISFR
NGGVDAFSQRMYSLVGLGHRQLRDKLAINHSKMLAYSGILANPGRSPEIICGLVSHCFDLSEVTLQNWQRRKVDIEPDQQ
NSLGSYSLKNGEKLAGRSVLGNFVLGTRVPDLSGKFQLSITSLTRKQFLSFLPSGENFLPLTMFVSFILRDQLAWDLHLG
LAPEQVGAMRLGDNKSALLGWTSFLGTPEERPSVTIRVRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec22 YP_851423.1 hypothetical protein Not tested PAI II APEC-O1 Protein 3e-95 56
aec22 AAQ96716.1 Aec22 Not tested AGI-1 Protein 3e-95 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EKO11_3694 YP_005279331.1 type VI secretion protein VFG2079 Protein 2e-60 41