Gene Information

Name : EKO11_3689 (EKO11_3689)
Accession : YP_005279326.1
Strain : Escherichia coli KO11FL
Genome accession: NC_016902
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3851588 - 3852088 bp
Length : 501 bp
Strand : +
Note : KEGG: ssn:SSON_0254 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Uncharacterised conserved protein UCP028301

DNA sequence : 
ATGAGCAAAAAATTTGAAGGCAGCGTCGCGCCTCGCGAGCGTATTAATATATCGTATGTCCCAAAAACAGATGGCCAGAC
GGCTGAAGTGGAACTTCCGCTTAACATGCTCGTTGTCGGCGATACCGGAAATACGCAGGAAACATCCTCACTGGATGAAC
GTCAGGCAGTTTCCGTTAACAAGCACAATTTCGGTGCAGTGATGGCTGAAGCAGCCATTGGCCTCAATTTTACTGTCCCC
GCCACCCTGAAGGGAAGCACAACAGACGATGAACTGAATGTGGCGCTGAATATCAAATCACTGGATGATTTTTCACCAGA
TAGCGTGGCCCGGCAGGTTCCGGAAGTGAATAAATTGCTGGAACTGCGTGAAGCACTGACTGCACTGAAGGGGCCGATGG
GTAACCTTCCGGCATTCCGTACCCAGCTCCAGGCATTGCTGGAAAATGAAGAGTCCCGCGAGCAGTTGCTCAAAGAAATC
GGTCTGGTGAGCAATAAATAA

Protein sequence : 
MSKKFEGSVAPRERINISYVPKTDGQTAEVELPLNMLVVGDTGNTQETSSLDERQAVSVNKHNFGAVMAEAAIGLNFTVP
ATLKGSTTDDELNVALNIKSLDDFSPDSVARQVPEVNKLLELREALTALKGPMGNLPAFRTQLQALLENEESREQLLKEI
GLVSNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 9e-43 54
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 6e-43 54
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 6e-36 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EKO11_3689 YP_005279326.1 type VI secretion protein VFG2092 Protein 1e-40 58
EKO11_3689 YP_005279326.1 type VI secretion protein VFG2474 Protein 1e-33 44