|
Name : EKO11_3664 (EKO11_3664) Accession : YP_005279302.1 Strain : Escherichia coli KO11FL Genome accession: NC_016902 Putative virulence/resistance : Virulence Product : Fis family sigma-54 specific transcriptional regulator Function : - COG functional category : - COG ID : - EC number : - Position : 3825018 - 3826004 bp Length : 987 bp Strand : - Note : KEGG: eoi:ECO111_0259 putative lateral flagellar RpoN-interacting regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase DNA sequence : ATGTCTGAACTTATTGCAACTGCCGCTTCCAGCATTAACGCTTTTACTCTGGCAAAGCGTGTCGCCGCATTTAACGTGCC GGTGCTCATTCAGGGCGAAACCGGCGCGGGCAAAGAGTGCGTGGCGAAATATATTCACACAGTCGCCTTTGGTGAAAATG AAAACGCGCCCTATATCGGCGTGAACTGCGCTGCGATCCCGGAAAACATGCTGGAAGCAACCTTATTTGGCTACGACAAA GGCGCATTTACCGGCGCAATTGCCAGTGTGCCAGGAAAAATGGAACTGGCGAATAACGGCACCTTATTACTCGATGAAAT TGGCGATATGCCGCTGGCGTTACAGGCCAAAATATTACGCGTATTGCAGGAACAACAGGTTGAGCGATTAGGCAGCAACC GACAAATTAAACTCAATTTTCGCCTGATTGCCTGCACCAATAAAAACCTTGAGCAGGAAGTCGCCGCCGGGCGTTTTCGT GAAGATCTCTATTATCGTCTGGCGGTTATTCCTATTACCATGCCGCCGCTGCGTGAACGTCTGAACGATATTATTCCGCT GGCAGAGTCATTTATAAAAAAATACTCCACGGTGCTGGTGAAAAATATCACCCTTTCAGAATCTACCCGCCGTGCGATGC TGAATTACCGCTGGCCCGGCAATGTGCGCCAGCTGGAGAACGCCATTCAGCGGGGAATGATTTTAAATCGCGACGGCGTG ATTTACCCGGACGCCTTAGGCCTGCCGGAAAATGACATTGCCGACCACAGCGAACTGCAATGGCCTGCTCAGCCCGCCGT ACACATTGCCGAAACCAGCGATTTAGGCCAGCACGGACGAAGCGCCCAGTATCAATATATCGCTGACCTGATGCGTAAAT ATCAGGGCAACCGCAGCAAAATCGCCGACCTGTTAGGTATTACCCCGCGCGCACTGCGCTATCGACTGGCCTCCATGCGC AAGCACGGTATCGAAGTTTTCTCCTGA Protein sequence : MSELIATAASSINAFTLAKRVAAFNVPVLIQGETGAGKECVAKYIHTVAFGENENAPYIGVNCAAIPENMLEATLFGYDK GAFTGAIASVPGKMELANNGTLLLDEIGDMPLALQAKILRVLQEQQVERLGSNRQIKLNFRLIACTNKNLEQEVAAGRFR EDLYYRLAVIPITMPPLRERLNDIIPLAESFIKKYSTVLVKNITLSESTRRAMLNYRWPGNVRQLENAIQRGMILNRDGV IYPDALGLPENDIADHSELQWPAQPAVHIAETSDLGQHGRSAQYQYIADLMRKYQGNRSKIADLLGITPRALRYRLASMR KHGIEVFS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | AAD24684.1 | sigma-54-dependent enhancer-binding protein HrpS | Virulence | Hrp PAI | Protein | 5e-39 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EKO11_3664 | YP_005279302.1 | Fis family sigma-54 specific transcriptional regulator | VFG1249 | Protein | 4e-71 | 48 |
