Gene Information

Name : EKO11_3276 (EKO11_3276)
Accession : YP_005278923.1
Strain : Escherichia coli KO11FL
Genome accession: NC_016902
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3419837 - 3420829 bp
Length : 993 bp
Strand : +
Note : PFAM: transport system permease protein; KEGG: sfv:SFV_0537 iron-enterobactin transporter permease

DNA sequence : 
ATGATTTACGTCTCTCGCCGATTACTCATCACCTGTTTGCTGCTGATTTCCGCCTGTGTGGTTGCAGGTATCTGGGGATT
ACGCAGCGGTGCCGTCACGCTGGAAATCTCGCAGGTATTCGCCGCGTTGATGGGCGATGCGCCGCGCAGTATGACGATGG
TGGTCACCGAATGGCGTTTACCACGCGTGCTGATGGCGCTGTTGATTGGCGCGGCACTGGGCGTCAGCGGTGCGATTTTT
CAGTCGCTGATGCGTAACCCGCTCGGCAGCCCTGACGTAATGGGCTTTAACACCGGGGCGTGGAGCGGCGTGCTGGTGGC
GATGGTGCTGTTTGGTCAGGACCTGACGGCTATCGCGCTGTCAGCAATGGTGGGCGGCATTGTCACTTCGCTTCTGGTCT
GGCTGCTCGCCTGGCGTAACGGCATCGACACCTTTCGGTTGATTATTATCGGTATCGGTGTTCGCGCCATGCTGGTGGCC
TTTAATACCTGGCTGTTGCTGAAAGCGTCTTTAGAAACGGCGCTAACAGCGGGTTTGTGGAATGCCGGATCGCTCAACGG
CCTGACGTGGGCAAAAACCTCGCCTTCCGCACCCATCATTATATTGATGCTCATTGCCGCCACCTTGCTGGTGCGGCGAA
TGCGCTTGCTGGAGATGGGCGATGATACCGCCTGCGCGCTGGGCGTCAGCGTCGAACGTTCGCGTCTGTTAATGATGCTG
GTTGCAGTGGTGCTTACCGCTGCGGCAACGGCGCTTGCCGGGCCGATTTCCTTTATTGCTTTAGTCGCGCCGCACATTGC
CCGACGCATTAGCGGCACCGCTCGCTGGGGGCTAACCCAGGCGGCGCTGTGCGGGGCGCTGTTACTGCTGGCGGCCGATC
TCTGCGCCCAACAACTGTTTATGCCGTATCAACTTCCGGTTGGCGTCGTTACCGTCAGCCTCGGCGGTATTTACCTTATC
GTCTTGTTAATTCAGGAGTCTCGCAAAAAATGA

Protein sequence : 
MIYVSRRLLITCLLLISACVVAGIWGLRSGAVTLEISQVFAALMGDAPRSMTMVVTEWRLPRVLMALLIGAALGVSGAIF
QSLMRNPLGSPDVMGFNTGAWSGVLVAMVLFGQDLTAIALSAMVGGIVTSLLVWLLAWRNGIDTFRLIIIGIGVRAMLVA
FNTWLLLKASLETALTAGLWNAGSLNGLTWAKTSPSAPIIILMLIAATLLVRRMRLLEMGDDTACALGVSVERSRLLMML
VAVVLTAAATALAGPISFIALVAPHIARRISGTARWGLTQAALCGALLLLAADLCAQQLFMPYQLPVGVVTVSLGGIYLI
VLLIQESRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 2e-46 50
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 8e-47 50
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 8e-47 50
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 8e-47 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EKO11_3276 YP_005278923.1 transport system permease VFG0928 Protein 1e-107 97