Gene Information

Name : EKO11_1978 (EKO11_1978)
Accession : YP_005277659.1
Strain : Escherichia coli KO11FL
Genome accession: NC_016902
Putative virulence/resistance : Unknown
Product : transposase IS200-family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2078563 - 2078994 bp
Length : 432 bp
Strand : -
Note : PFAM: transposase IS200-family protein; KEGG: eoh:ECO103_1984 putative IS609 transposase TnpA

DNA sequence :
ATGATACTTTGGTCTGTGAAAAAAGAAACCGATATCCGGCGTGGAAGGCATTGTGTTTTCCTGATGCATGTTCACCTGGT
CTTTGTCACCAGATACAGACGTCAGATTTTTGACCATGACGCGACAGAAAAACTACGCGCTTACTTTTCAAATGTATGTG
CTGATTTTGAAGCTGAACTTGTTGAAATGGATGGCGAACCAGATCACGTCCATTTGTTAATTAACTATCCTCCCAAACTG
GCGATATCCAGTCTGGTAAACAGCCTCAAAGGCGTATCGGGTAGGTTACTGCGACGAGATCGACCAGATATTGCAGTCAG
GTATTACTACAAAGGCGTTTTGTGGAGTCCTGGCTATTTTGCCAGTAGCTGCGGAGGTGCGCCAATATCCGTCATCCGCC
AATACATTGAACAACAGCAAACACCTGGTTAG

Protein sequence :
MILWSVKKETDIRRGRHCVFLMHVHLVFVTRYRRQIFDHDATEKLRAYFSNVCADFEAELVEMDGEPDHVHLLINYPPKL
AISSLVNSLKGVSGRLLRRDRPDIAVRYYYKGVLWSPGYFASSCGGAPISVIRQYIEQQQTPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA AAR03856.1 transposase A-like protien Not tested cag PAI Protein 6e-39 60
tnpB CAJ31328.1 insertion sequence IS606 transposase homolog B Not tested cag PAI Protein 7e-38 59