Gene Information

Name : EKO11_1370 (EKO11_1370)
Accession : YP_005277066.1
Strain : Escherichia coli KO11FL
Genome accession: NC_016902
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1453409 - 1453924 bp
Length : 516 bp
Strand : -
Note : KEGG: sed:SeD_A0611 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n

DNA sequence :
ATGGCAAGCAGAGGCGTAAATAAGGTGATCATTATTGGTCGCCTTGGGCATGATCCAGAAATCAGATATTCACCATCAGG
AACGGCATTTGCAAACCTTACCGTTGCTACGTCAGAACAATGGCGTGATAAGAAAACTGGAGAGCAAAAGGAGCAGACGG
AGTGGCACCGCGTGGTAATGAGCTGGAAACTGGCAGAAATTGCCAGCGAATATCTGCGAAAAGGCTCTGAGGTTTATCTT
GAAGGCAAATTGCGGACAAGAAAATGGCAGGATCAAAGCGGACAGGATCGGTTCACTACCGAAGTCATCGTGGGCGTTGG
TGGAACCATGCAAATGCTTGGTGGCAAGCAAGGAGGCAATGAACAGTCTTCACCTCAGCGAAATAATGGTCAGCAACAAA
GACAGCAACCTCAGCAGCAGGGAAATCACAGCGAACCACCTATGGATTTTGACGACGATATCCCCTTTGCACCAGTAACT
CTCCCCTTCCCTCGTCACGCTATTCACGCAATTTAA

Protein sequence :
MASRGVNKVIIIGRLGHDPEIRYSPSGTAFANLTVATSEQWRDKKTGEQKEQTEWHRVVMSWKLAEIASEYLRKGSEVYL
EGKLRTRKWQDQSGQDRFTTEVIVGVGGTMQMLGGKQGGNEQSSPQRNNGQQQRQQPQQQGNHSEPPMDFDDDIPFAPVT
LPFPRHAIHAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 3e-42 58
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 3e-42 58
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 2e-42 58
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 9e-32 54