Gene Information

Name : Sbal678_0870 (Sbal678_0870)
Accession : YP_005272106.1
Strain : Shewanella baltica OS678
Genome accession: NC_016901
Putative virulence/resistance : Resistance
Product : beta-lactamase
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.2.6
Position : 989232 - 990119 bp
Length : 888 bp
Strand : +
Note : KEGG: shw:Sputw3181_0786 beta-lactamase; PFAM: penicillin-binding protein transpeptidase

DNA sequence :

ATGCGTTCGTTTGCCATATCGACTGTGTTGGTGATGTCCTCACTGTTAGCGTCGTCAATCTTTGCTGCCCCAGCTTTTGC
CTCAACAGCGGCGAAGACGGAGTGGCAAGAAACCCGCAGTTGGGATGCCATTTTTACTCAGCACCAAGTTGAACCGCAAC
AAGCTAAGCAACAACAAGCTAAACCGCAAAAAACTAAGTCCCAACAAGCCTCGGGCGTGGTGGTGCTGTGGAACGAAAAC
AAGCAACAGGGATATACCAACAATCTTAAACGTGCCAATCAAGGTTTTTTACCGGCATCGACCTTTAAAATCCCCAATAG
CTTGATTGCGCTCGAGTTGGGTGTGGTGAAGGATGAGCACCAAGTGTTTAAATGGGATGGTAAAAGTCGTGATATCGCCA
CTTGGAATCGTGATCATAACTTGATTACTGGGATGAAGTATTCGGTTGTGCCCGTCTATCAAGAGTTTGCCCGCCAAATT
GGTGAGGCGCGGATGTCGAAGATGATCGCCTCCTTCGATTATGGCAATGAGGATATCTCGGGTAACTTAGATAGCTTTTG
GCTCGATGGCGGTATTCGGATTTCGGCCACTGAGCAAATTGATTTCCTGCGTCGGCTTTATCACAACAAGATCCATGCCT
CAGAGCGCAGTCAACGAATCGTTAAGCAGGCCATGCTCACCGAGGCGAATTCTGACTATATTATTCGCGCAAAAACCGGC
TATGCGGTCAGAGCTGAGCCAAGTATTGGCTGGTGGGTGGGTTGGGTAGAGCTCGATGATAATGTGTGGTTTTTTGCAAT
GAATATGGATATCCCCAACGCTGCAGGTTTGCCATTGCGCCAAGCCATTACTAAAGAAGTATTAAAACTGGAACACGTAA
TTCCTTAG

Protein sequence :

MRSFAISTVLVMSSLLASSIFAAPAFASTAAKTEWQETRSWDAIFTQHQVEPQQAKQQQAKPQKTKSQQASGVVVLWNEN
KQQGYTNNLKRANQGFLPASTFKIPNSLIALELGVVKDEHQVFKWDGKSRDIATWNRDHNLITGMKYSVVPVYQEFARQI
GEARMSKMIASFDYGNEDISGNLDSFWLDGGIRISATEQIDFLRRLYHNKIHASERSQRIVKQAMLTEANSDYIIRAKTG
YAVRAEPSIGWWVGWVELDDNVWFFAMNMDIPNAAGLPLRQAITKEVLKLEHVIP

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
bla OXA-10	CAJ77047.1	Oxacillinase	Not tested	AbaR1	Protein	1e-57	50
blaOXA-129	AET25386.1	OXA-129 beta-lactamase	Not tested	PAGI-2(C)	Protein	5e-53	49
bla OXA-129	AFG30109.1	OXA-129 beta-lactamase	Not tested	PAGI-2	Protein	5e-53	49

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Sbal678_0870	YP_005272106.1	beta-lactamase	HM015773.1.gene6.p01	Protein	4e-96	79
Sbal678_0870	YP_005272106.1	beta-lactamase	HQ700343.1.gene1.p01	Protein	5e-93	78
Sbal678_0870	YP_005272106.1	beta-lactamase	AY500137.1.gene1.p01	Protein	4e-96	78
Sbal678_0870	YP_005272106.1	beta-lactamase	JN205800.1.gene6.p01	Protein	8e-96	78
Sbal678_0870	YP_005272106.1	beta-lactamase	AY343493.1.gene1.p01	Protein	3e-70	56
Sbal678_0870	YP_005272106.1	beta-lactamase	X75562.1.gene1.p01	Protein	4e-55	50
Sbal678_0870	YP_005272106.1	beta-lactamase	AY445080.1.gene1.p01	Protein	5e-57	50
Sbal678_0870	YP_005272106.1	beta-lactamase	Z22590.1.gene1.p01	Protein	3e-57	50
Sbal678_0870	YP_005272106.1	beta-lactamase	U37105.2.gene2.p01	Protein	8e-58	50
Sbal678_0870	YP_005272106.1	beta-lactamase	U59183.1.gene3.p01	Protein	5e-57	50
Sbal678_0870	YP_005272106.1	beta-lactamase	AM412777.1.gene1.p01	Protein	5e-57	50
Sbal678_0870	YP_005272106.1	beta-lactamase	AJ854182.1.gene1.p01	Protein	2e-57	50
Sbal678_0870	YP_005272106.1	beta-lactamase	NC_010410.6002874.p0	Protein	8e-58	50
Sbal678_0870	YP_005272106.1	beta-lactamase	AF231133.1.gene3.p01	Protein	1e-55	50
Sbal678_0870	YP_005272106.1	beta-lactamase	AM932669.1.gene2.p01	Protein	3e-53	49
Sbal678_0870	YP_005272106.1	beta-lactamase	X58272.1.gene1.p01	Protein	2e-53	49
Sbal678_0870	YP_005272106.1	beta-lactamase	AY619003.1.gene1.p01	Protein	3e-30	42
Sbal678_0870	YP_005272106.1	beta-lactamase	EU086830.1.gene1.p01	Protein	7e-32	42
Sbal678_0870	YP_005272106.1	beta-lactamase	EU086834.1.gene1.p01	Protein	5e-32	42
Sbal678_0870	YP_005272106.1	beta-lactamase	AY423074.1.gene1.p01	Protein	2e-34	42
Sbal678_0870	YP_005272106.1	beta-lactamase	JF273470.1.gene1.p01	Protein	3e-32	41