Gene Information

Name : Sbal678_0568 (Sbal678_0568)
Accession : YP_005271817.1
Strain : Shewanella baltica OS678
Genome accession: NC_016901
Putative virulence/resistance : Resistance
Product : O-succinylhomoserine (thiol)-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 642759 - 643922 bp
Length : 1164 bp
Strand : +
Note : KEGG: spc:Sputcn32_0616 O-succinylhomoserine (thiol)-lyase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein

DNA sequence : 
ATGGCAGAGCGTCAATTAGCCACACTGGCAGTGCGTCAGGGTATCGAAAGCGATACTCAATATGGTGCAGTTGTGCCACC
GATTTATTTGTCGACTAATTACGCCTTCGATGGTCATAAAAATCCTCGCGAATTCGATTACAGTCGTTCAGGCAACCCAA
CACGCTGTATTTTAGGCGAAGCATTAGCGCAATTAGAAAAGGGCGCCACTGGCATAGTGACCTGCACTGGCATGGCGGCC
ATCACCTTAGTGACCACTTTGCTCGGCCCTGATGACCTGTTGGTTGTGCCCCACGATTGTTACGGCGGTTCTTACCGTTT
ATTTACTAACTTGGCGAAGAAAGGCCAGTTTAAGTTGATTGTGGTTGATCAAACCGACAGCCAAGCGTTAGCCGCCGCTA
TCGGGCAGAATCCTAAGATGGTGTGGCTCGAAACTCCATCTAACCCGCTATTGCGAGTGGTGGATATCGAAGCCATTGCC
AAGGCGAGCCATGAGGTCGGCGCGCTGGTGGTGGTCGATAACACTTTTTTATCGCCGATATTGCAACAACCCCTATTGTT
AGGCGCGGATATCGTTATCCACTCCACCACTAAATACATCAATGGCCACAGCGATGTGGTTGGCGGCGCTGTGGTTGCTA
AAGATGCACAAATCGGCGAAAGCTTACATTGGTGGTCGAACACGTTAGGCTTAACGGGGTCGGCTTTTGATAGCTACTTA
ACCCTGCGCGGCCTACGTACCTTAGCGGTGCGAATTCGTGAACATCAAACCAATGCCCAGCGCATTGTTGAGGTATTGAC
GCAAAGCCCTGTGGTGAGCAAAGTTTATTACCCTGGTCTTGCGGATCACCCTGGTCATGCGATTGCAGCCAAGCAACAAC
AGGGCTTTGGCGCTATGCTGAGTTTTGAGCTCAAGGGCGGCGAGGCAGAAGTGGTGGCCTTTTTAGGTGCACTCAGCTTA
TTTAGTGTGGCGGAAAGTTTAGGTGGCGTTGAAAGTTTGGTGGCCGTGCCCGCAACTATGACCCACAGAGCCATGGAGCC
GCAGGCGCGTTTTGAGGCAGGCATTAAGGACACCCTATTGCGTCTATCGGTGGGTATTGAAGATGCCGCCGATTTAGTTG
CAGATATTCAAGCAGGATTAGCCGCCGTTGCGGCTTGTCAGTAG

Protein sequence : 
MAERQLATLAVRQGIESDTQYGAVVPPIYLSTNYAFDGHKNPREFDYSRSGNPTRCILGEALAQLEKGATGIVTCTGMAA
ITLVTTLLGPDDLLVVPHDCYGGSYRLFTNLAKKGQFKLIVVDQTDSQALAAAIGQNPKMVWLETPSNPLLRVVDIEAIA
KASHEVGALVVVDNTFLSPILQQPLLLGADIVIHSTTKYINGHSDVVGGAVVAKDAQIGESLHWWSNTLGLTGSAFDSYL
TLRGLRTLAVRIREHQTNAQRIVEVLTQSPVVSKVYYPGLADHPGHAIAAKQQQGFGAMLSFELKGGEAEVVAFLGALSL
FSVAESLGGVESLVAVPATMTHRAMEPQARFEAGIKDTLLRLSVGIEDAADLVADIQAGLAAVAACQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 7e-60 41
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-61 41
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-52 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal678_0568 YP_005271817.1 O-succinylhomoserine (thiol)-lyase BAC0207 Protein 5e-53 41