Gene Information

Name : Sbal678_0474 (Sbal678_0474)
Accession : YP_005271724.1
Strain : Shewanella baltica OS678
Genome accession: NC_016901
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, LuxR family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 532906 - 533508 bp
Length : 603 bp
Strand : -
Note : KEGG: spc:Sputcn32_0534 response regulator receiver protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR

DNA sequence : 
ATGTCTATAAAACTGCCGCTGTATTTAGTTGATGACGATGAAGCGATTCTGGATTCGCTGGGTTTTATGCTTGGGCAATT
TGGCTACCAAGTGCAAACCTTCAACAGCGGCCGCGACTTCCTTGCGCACTGCGCATTATCGCAGGCAGGCTGCGTGATTT
TAGATAGCCGAATGCCAGAGATCACCGGCCAAGAAGTACAGCAAAAACTGCTCGAAACCCACAGTCCGCTTGGCGTCATC
TTTCTCACTGGCCACGGCGACTTACCTATGGCGCTGAGCGCCTTTCGTAAGGGAGCCTGCGACTTTTTTCAAAAACCTGT
GTCCGGCAAGGCATTAGTACAAGCGATAGAAAAAGCACAGCGTGAAAGCCAGGCGGCCTTCGAGCAGCAAAGTCTGCAAC
ATAAGTTTGACCAACTGACCGAGCGCGAACAGCAAGTGTTAGCCCATGTGATCCAAGGCATGACCAATAAGCAAATCTCG
GAGGCGATGTTTTTATCCCTGCGCACAATTGAAGTACACCGCGCAAAAATCATGAAAAAACTCGAAGTGAATAATATGGC
AGAGTTAGTGCAGCACTTAGGGAATCTACATTCAGCCTTATAA

Protein sequence : 
MSIKLPLYLVDDDEAILDSLGFMLGQFGYQVQTFNSGRDFLAHCALSQAGCVILDSRMPEITGQEVQQKLLETHSPLGVI
FLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAQRESQAAFEQQSLQHKFDQLTEREQQVLAHVIQGMTNKQIS
EAMFLSLRTIEVHRAKIMKKLEVNNMAELVQHLGNLHSAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 4e-36 43
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 4e-36 43
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 4e-36 43
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 3e-36 43
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 4e-36 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal678_0474 YP_005271724.1 two component transcriptional regulator, LuxR family VFG0488 Protein 1e-36 43