Gene Information

Name : Sbal678_4497 (Sbal678_4497)
Accession : YP_005275672.1
Strain : Shewanella baltica OS678
Genome accession: NC_016901
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5218866 - 5220014 bp
Length : 1149 bp
Strand : +
Note : KEGG: shw:Sputw3181_0063 UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase

DNA sequence :
GTGGGGATGGGCTATGTTGGCCTATCAAATGCAGTCTTATTGGCGCAGCAAAATCGAGTTACTGCAATTGATTTAGTTCC
TGAACGTGTCAAGCAAGTTAACGAGCGTAAATCCACTGTGGTCGATGAATTAATCGAAGATTACCTGCAAAACAAACCGT
TGAATTTAACTGCGACAACGGAAAATGTAGCCTTTCAATCGGCTGACTTTGTGATTATTGCGACTCCAACAGACTACGAT
CCTCAGACTAATTATTTTAATACCCATTCGGTTGAAAGCGTCATTCGTGATGTACTCGCAGTTAATCCTGATACGACGAT
TATCATCAAATCGACTGTACCCGTCGGCTATACCACTGCATTAAGGCACAAGTTTAAGAGCGACAACATACTCTTTTCTC
CAGAGTTTTTACGCGAAGGGAAAGCCTTGCATGACAACCTTCATCCCTCACGGATCGTCGTCGGTGAACGCTCGGCGCGT
GCCCAAGTCTTTGCAGACCTTTTAGCCAAGGCGGCAATCAAGCAAGATATTCCTATTTTGCTGACCGATAGCACCGAAGC
CGAAGCGATTAAGTTATTTGCTAATACATTTCTCGCCATGCGGGTCGCCTACTTTAACGAACTCGATACCTATGCAGAGA
GTCGAGGATTAAATACTCGCCAGATTATTGAGGGGGTTAGCCTCGATCCGCGTATTGGTGATTATTACAACAATCCTTCT
TTTGGCTATGGCGGGTACTGTCTTCCGAAAGACACTAAGCAATTACTGGCTAACTACAATGATGTCCCAAACAATTTAAT
CAGTGCCATTGTCGACTCAAACACCACACGAAAAGACTTTATCGCCGACGCTATTATCCGTAAGCAGCCAAAATGTGTAG
GAATTTATCGTTTGATCATGAAAGCCGATTCAGACAATTTCCGCGCCTCAGCAGTGCAAGGCGTGATGAAGCGCATTAAA
GCGAAAGGCATTGAAGTCGTCGTGTTTGAGCCTGTACTTAAAGAAGATTACTTTTTCAAATCTCGCGTGATGAGAGACTT
AACTGAATTTAAGTCAATATGTGATGTGATCGTCTCCAACCGTATGGTTGATGAACTCAATGATGTTGCGGATAAAGTCT
ATACCCGAGATCTATTTCACCATGATTAA

Protein sequence :
MGMGYVGLSNAVLLAQQNRVTAIDLVPERVKQVNERKSTVVDELIEDYLQNKPLNLTATTENVAFQSADFVIIATPTDYD
PQTNYFNTHSVESVIRDVLAVNPDTTIIIKSTVPVGYTTALRHKFKSDNILFSPEFLREGKALHDNLHPSRIVVGERSAR
AQVFADLLAKAAIKQDIPILLTDSTEAEAIKLFANTFLAMRVAYFNELDTYAESRGLNTRQIIEGVSLDPRIGDYYNNPS
FGYGGYCLPKDTKQLLANYNDVPNNLISAIVDSNTTRKDFIADAIIRKQPKCVGIYRLIMKADSDNFRASAVQGVMKRIK
AKGIEVVVFEPVLKEDYFFKSRVMRDLTEFKSICDVIVSNRMVDELNDVADKVYTRDLFHHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 7e-91 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal678_4497 YP_005275672.1 nucleotide sugar dehydrogenase VFG0963 Protein 4e-97 55