|
Name : join (Sbal678_4444) Accession : YP_005275619.1 Strain : Shewanella baltica OS678 Genome accession: NC_016901 Putative virulence/resistance : Unknown Product : transposase IS3/IS911 family protein Function : - COG functional category : - COG ID : - EC number : - Position : 5155381 - 5156558 bp Length : 1178 bp Strand : - Note : KEGG: sfr:Sfri_4014 transposase IS3/IS911 family protein; manually curated; PFAM: transposase IS3/IS911 family protein DNA sequence : ATGAGATCGACAACCAGAAAAACATTTAGTGCTGAATTCAAACTTGAAGCAGCCCAATTAGTCCTCGATAAAAACCATAG CATCATCGAAGCTGCAAAGGCGATGAACGTAGGTAAGTCCACTATGGATAAATGGGTGAGACAGTTAAAACTAGAACGCC AGGGTGGCACACCAAAAGCATCTCCGATTACCCCAGAACAAATTGAAATCCGTGAACTGAAGAAACAAATAGCGCGTCTT GAGGAGCATAATCTAATCCTAAAAAAGGCTACCGCTCTCTTGATGTCAGACTCGATGAACAATTTACGCTGATCAGCGCA CTCAAGCAGAGCCACTCTATTCTCACAATTTGTAATGCATTCAAAGTGCATCGAAGTAGCTATAAATATTGGCTAAAAAG AAAAGAACATATCGATGCTGATTTTACAATTTTATGCAGTGAAGTGAAGGCCGCGCATCGTATTAGTCATGGCTCTGCCG GTGCTCGAACGATAGCGCAATTAGTGACTAACAAAGGGATCTGTCTCAGTCGTTATCGAGCCCGTAATCTAATGAAAAAG CTTGGGTTATTGAGCTGTCAGCAGCCTAAACATTCTTATAGGAAAGCTGCACAAGAGCATGTAGCGATCCCGAATACGCT TAATCGACAGTTTGCCGTAACTCAACCAGATCAAGTGTGGTGTGGCGATGTGACGTATGTTTGGGTCGGTAATCGTTGGG CATATTTAGCGGTTGTTCTAGACCTGTTTTCCCGTAAACCTGTTGGGTGGGCTTTGTCATTATCACCTGACAGCGAGCTG ACCTGTAAAGCCTTGAAAATGGCATTTGAGTTAAGGGGGAAACCTGAGAATGTGATTTATCACAGCGATCAAGGTTCACA TTACACAAGCTTGAAATTCAGACAATTAATATGGCGTCTTCAGATTGAGCAAAGTATGAGTCGCCGCGGGAATTGTTGGG ATAACGCACCAATGGAGCGTTTCTTTAGAAGTTTGAAATCTGAGTGGATACCCGCCAGTGGTTATGGGAATTTTACAGAA GCAGATAAAGAGATCACAAATTACATCACTGGATATTACAGTGAGACCAGACCCCATCAATATAATGGTGGGTTAACGCC AAATGAGTCAGAACGTTTATATTGGAATGACTCTAAAACCGTGGCCAATTTTACTTGA Protein sequence : MRSTTRKTFSAEFKLEAAQLVLDKNHSIIEAAKAMNVGKSTMDKWVRQLKLERQGGTPKASPITPEQIEIRELKKQIARL EEHNLILKKGYRSLDVRLDEQFTLISALKQSHSILTICNAFKVHRSSYKYWLKRKEHIDADFTILCSEVKAAHRISHGSA GARTIAQLVTNKGICLSRYRARNLMKKLGLLSCQQPKHSYRKAAQEHVAIPNTLNRQFAVTQPDQVWCGDVTYVWVGNRW AYLAVVLDLFSRKPVGWALSLSPDSELTCKALKMAFELRGKPENVIYHSDQGSHYTSLKFRQLIWRLQIEQSMSRRGNCW DNAPMERFFRSLKSEWIPASGYGNFTEADKEITNYITGYYSETRPHQYNGGLTPNESERLYWNDSKTVANFT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| overlap with orfA characteristic of IS3 family members | AGK06947.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 1e-101 | 69 |
| orfB | AGK06993.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 1e-101 | 69 |
| orfB | AGK07051.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 1e-101 | 69 |
| VC1789 | NP_231424.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 1e-101 | 69 |
| orfB | YP_001217329.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 1e-101 | 69 |
| orfB | ACX47958.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 1e-101 | 69 |
| VPI2_0008c | ACA01825.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 1e-101 | 69 |
| orfB | AGK06910.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 1e-101 | 69 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| join | YP_005275619.1 | transposase IS3/IS911 family protein | VFG1122 | Protein | 6e-102 | 69 |
