Gene Information

Name : Sbal678_0389 (Sbal678_0389)
Accession : YP_005271640.1
Strain : Shewanella baltica OS678
Genome accession: NC_016901
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.56
Position : 433015 - 433728 bp
Length : 714 bp
Strand : +
Note : TIGRFAM: ribonuclease PH; KEGG: shw:Sputw3181_0332 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2

DNA sequence :
ATGCGTCCAAGTAACAGAACGCCAGCACAAACTCGTCCCATCACTATCACTCGCCAGTTTACGGCCCATGCCGAAGGTTC
TGTGTTAGTGGAATTTGGCGAAACGAAAGTGCTTTGTACCGCCAGTTTTACTGAAGGTGTGCCACGTTTCCTTAAAGGTC
AGGGTCAAGGCTGGGTGACGGCGGAATACGGCATGTTGCCACGTTCGACCCATAGCCGTATGGATCGTGAAGCCGCTCGC
GGTAAGCAATCTGGCCGTACGCAAGAAATTCAACGTCTTATCGGCCGTGCTCTGCGCGCTTGTGTAGATATGAAAGCCCT
AGGCGAAAACACTATCGTGATCGACTGTGATGTGATCCAAGCTGACGGTGGCACGCGCACTGCCTCTATCACTGGCGCCT
GTGTGGCCTTAGTGGATGCGTTGAACTGGGCGCGTGGTAAAGGCATCATTAAATCTAACCCGCTGAAATTCCTTATCGCT
GCTGTCAGCGTAGGTATTTACAAGGGTGAAGCGATCAGCGATCTAGAATATATCGAAGACAGCGCCGCTGAAACTGACAT
GAACGTGGTGATGACGGAAACGGGAAAGATCATCGAAATTCAAGGCACCGCCGAAGGCGAGCCATTCAGCCATGAAGAAT
TACTCGAACTGTTGGCATTGGCGAAGAACAGTATTCGTGAAATCGTCGATGTGCAGAAAGCCGCACTGAACTAA

Protein sequence :
MRPSNRTPAQTRPITITRQFTAHAEGSVLVEFGETKVLCTASFTEGVPRFLKGQGQGWVTAEYGMLPRSTHSRMDREAAR
GKQSGRTQEIQRLIGRALRACVDMKALGENTIVIDCDVIQADGGTRTASITGACVALVDALNWARGKGIIKSNPLKFLIA
AVSVGIYKGEAISDLEYIEDSAAETDMNVVMTETGKIIEIQGTAEGEPFSHEELLELLALAKNSIREIVDVQKAALN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-60 58