Gene Information

Name : Sbal678_3888 (Sbal678_3888)
Accession : YP_005275070.1
Strain : Shewanella baltica OS678
Genome accession: NC_016901
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, LuxR family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4492664 - 4493284 bp
Length : 621 bp
Strand : -
Note : KEGG: shw:Sputw3181_3508 response regulator receiver protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR

DNA sequence : 
ATGAGTCTTGCCTTACCTGTGTATTTAATCGATGACGATGACTCAGTGCGTCGCTCTTTGCGTTTTATGCTCGAAAGTTA
TGGCCTCAAGATCACCGACTTTGATAGCGCCGAAGCCTTTTTTACCGCCGTAGACTTAACCCTACCGGGTTGTGCGCTGG
TTGATGTGCGTATGCCAGGCTTGAGCGGCCCGCAGTTGCATCTTGAATTAGTCTCCAAAAATAGTCCGTTAGCTGTGATT
TATTTGACCGGACATGGCGATGTGCCTATGGCGGTTGAAGCGCTCAAACTCGGTGCGGTGGATTTTTTCCAAAAGCCCGC
CGATGGCGCTAAGTTAGCCGAAGCGGTCGTCAAAGCGTTGGAACATGCTAAAACGCATTATCAAGACAATCAGTATCTTG
AGACGTATCAAGCGCTCACGCCAAGGGAGCGGGAGATACTCAACCTGATTGCCCAAGGGTTGAAGAACCAAGAGATCGCC
GATAACCTCTGTATTGCCATGCGTACGGTCGAGATCCACCGTGCCAATTTGATGAAGGGCATGCAAGTAGGATCGCTGGC
GGAAATGATGCTGATCTATAGCCGGATCGCCGAACGCCTGCGCCTTGAAGATAACCGCTAA

Protein sequence : 
MSLALPVYLIDDDDSVRRSLRFMLESYGLKITDFDSAEAFFTAVDLTLPGCALVDVRMPGLSGPQLHLELVSKNSPLAVI
YLTGHGDVPMAVEALKLGAVDFFQKPADGAKLAEAVVKALEHAKTHYQDNQYLETYQALTPREREILNLIAQGLKNQEIA
DNLCIAMRTVEIHRANLMKGMQVGSLAEMMLIYSRIAERLRLEDNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 6e-33 44
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 9e-33 44
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 9e-33 44
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 9e-33 44
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 9e-33 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal678_3888 YP_005275070.1 two component transcriptional regulator, LuxR family VFG0488 Protein 3e-33 44