Gene Information

Name : Sbal678_3682 (Sbal678_3682)
Accession : YP_005274870.1
Strain : Shewanella baltica OS678
Genome accession: NC_016901
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4265042 - 4267036 bp
Length : 1995 bp
Strand : -
Note : TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: spc:Sputcn32_0872 transketolase; SMART: Transketolase central region

DNA sequence :
ATGTCTTCCCGTAAAGTACTCGCAAACGCAATCCGTGCGTTAAGTATGGATGCAGTTCAAAAAGCAAATTCAGGCCATCC
CGGCGCCCCAATGGGTATGGCAGATATTGCTGAAGTGCTGTGGAATGATTTCCTTAAGCACAACCCGAACAATCCGAAAT
GGGTAGATAGAGACCGTTTCGTCCTTTCTAACGGTCACGGTTCAATGCTGATTTACTCTTTACTTCACCTGACTGGTTAT
GAATTACCAATTGAAGAGCTAAAACAGTTCCGTCAATTGCATTCTAAAACACCGGGTCACCCAGAATACGGTTACACCCC
AGGTGTTGAAACCACAACGGGTCCACTCGGCGCGGGCATCAGCAATGCTGTCGGTATGGCGATTGCTGAAAAAACCTTAG
CGGCACAGTTTAACCGTGATGGTCACGATATCGTTGATCACTACACTTACTGCTTCGTCGGCGACGGCTGTTTGATGGAA
GGTATTTCCCACGAAGCCTGTTCATTAGCCGGTACTTTAGGTCTAGGCAAACTGGTCGCATTTTGGGATGACAACGGTAT
TTCTATCGATGGCCATGTTGAAGGCTGGTTCACCGATGATACGCCAAAACGTTTTGAAGCTTACGGCTGGCATGTGATTG
CCGGTGTTGACGGTCACGATAGCGCGGCAATCCGTGCAGCTATCGAAGCGGCGAAAGCGGTGACCGATAAACCAACCATG
ATTTGCTGCAAAACCATTATTGGTTTTGGTTCACCCAACAAATCTGGCAGCCACGATTGCCACGGCGCGCCATTAGGCGA
TGCGGAAATCGCAGCAGCCCGTGAATTCCTTGGCTGGCCATACGCACCGTTTGAAATCCCTGCTGACGTTTATGCCGGTT
GGGATGCCAAAGAAGCCGGTGCTGCCCGTGAAGCGGCATGGAACGAGAAGTTTGCGGCTTATAGCGCAGCTCACCCAGAA
CTGGCTGCTGAATATGAGCGCCGCGTACTGAAAGGTGAATTACCTGCTGATTTTGAAGAAAAAGCACAGGCATTCGTGCA
AGCATCACAGGACAAAGCCGAAGGTATTGCGAGCCGTAAAGCCTCACAAAATGCCATCGGTGCTTTCGGTGCTATGTTAC
CTGAACTGTTAGGCGGCTCTGCTGACTTAGCAGGTTCTAACTTGACACTGTGGTCAGGTTCTAAAGGTATTCAAGACGAT
CCAGCTGGTAACTACATTTACTACGGCGTGCGTGAATTCGGCATGAGCGGCATTATGAACGGTGCTTCGCTGCATGGTGG
TTTCATCAACTACGGCGCAACTTTCATGATGTTCATGGAATACGCGCGTAACGCAGTCCGCATGTCGGCGCTGATGGGCA
TTCAAAACATCTTCGTTTATACCCATGACTCTATCGGTCAAGGTGAAGATGGCCCAACGCATCAACCAGTTGAGCAATTA
GCTAACCTACGTATGACGCCAAATATGGCCGTATGGCGCCCATGTGATGCGGCAGAAACGGCGGTTTCTTGGAAAGCTGC
GATTCAACGTCGCAATGCGCCAACGTCACTGATTTTCAGCCGTCAAAACCTCAAAGCCCAAGCGCGTACCGCTGAGCAAT
TAGCCAACGTGGCAAAAGGCGCTTATGTACTGCAAGACTGTGCGGGTACACCAGAACTGATCCTGATCGCAACCGGTAGC
GAAGTACAATTGGCGATGGATTCTGCGGCTGCATTAACCGAACAAGGTAAACAAGTTCGCGTAGTTTCTATGCCATCGAC
AACTGAGTTCGATAAGCAAGATGCAGCGTATAAAGAATCGGTATTACCACGCGCTGTGACTAAACGTGTGGCTATCGAAG
CGGCGCATACCGATTTCTGGTACAAGTACGTCGGTTTTGAAGGCACTGTTGTTGGCATGACCACTTTTGGTGAGTCAGCG
CCGGGTAACGTGCTATTGAATCACTTCGGTTTCACCGTTGAAAATGTGCTGAATGCTGCAAAATCATTGGGCTAA

Protein sequence :
MSSRKVLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPNNPKWVDRDRFVLSNGHGSMLIYSLLHLTGY
ELPIEELKQFRQLHSKTPGHPEYGYTPGVETTTGPLGAGISNAVGMAIAEKTLAAQFNRDGHDIVDHYTYCFVGDGCLME
GISHEACSLAGTLGLGKLVAFWDDNGISIDGHVEGWFTDDTPKRFEAYGWHVIAGVDGHDSAAIRAAIEAAKAVTDKPTM
ICCKTIIGFGSPNKSGSHDCHGAPLGDAEIAAAREFLGWPYAPFEIPADVYAGWDAKEAGAAREAAWNEKFAAYSAAHPE
LAAEYERRVLKGELPADFEEKAQAFVQASQDKAEGIASRKASQNAIGAFGAMLPELLGGSADLAGSNLTLWSGSKGIQDD
PAGNYIYYGVREFGMSGIMNGASLHGGFINYGATFMMFMEYARNAVRMSALMGIQNIFVYTHDSIGQGEDGPTHQPVEQL
ANLRMTPNMAVWRPCDAAETAVSWKAAIQRRNAPTSLIFSRQNLKAQARTAEQLANVAKGAYVLQDCAGTPELILIATGS
EVQLAMDSAAALTEQGKQVRVVSMPSTTEFDKQDAAYKESVLPRAVTKRVAIEAAHTDFWYKYVGFEGTVVGMTTFGESA
PGNVLLNHFGFTVENVLNAAKSLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 0.0 74
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 0.0 66