Gene Information

Name : Sbal678_3666 (Sbal678_3666)
Accession : YP_005274854.1
Strain : Shewanella baltica OS678
Genome accession: NC_016901
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4242375 - 4243277 bp
Length : 903 bp
Strand : -
Note : KEGG: shw:Sputw3181_3283 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein

DNA sequence :
GTGCCTAAGACATATCAGCCCGACCCGCTCATTGATGTTTTTCTTGATGATCTCTGGTCGAACAAGGGACTGAGTGACAA
CACCTTATCGGCCTATCGCACCGATTTGCGCCATTTTGATCGTTATCAAGCTCAGCAAGGGGTAACGCTGCTCTCGGTTT
CTCAGGCGGATGTCAGAGCGTATTTAGCCTTTAGAGTCGAGCAGGATTTTGCGCGCACCAGTAGTGCTCGGCTGCTCAGC
AGTTTGCGGCGTTTCTATACCTATTTAGTGCAGACCAAGCAGATTTCAGCCGATCCTATGGCCTTAGTTGAGTCGCCCAA
ATTAACCCGCCATTTACCCGATTCATTGAGTGAATCACAGGTCGATCGCTTGTTGTCTGAGCCCAATGTGGAAGATGCGG
TCGAATGTCGTGACAAAGCCATGCTAGAGCTGTTGTATGCGACAGGTTTGAGGGTGAGTGAGCTCGTTGGCTTGACGATG
GAGCAGATGAGCCTGCGCCAAGGCTTAGTGCGCATTGTGGGTAAGGGCGGCAAAGAGCGTCTCGTACCACTGGGTGAATT
AGCGATTACCGAGGTCGAGAGCTACATGAAGTTTGCGCGGCAAGAGTTGCTCGGCAATAAACAATCCGATGTGGTGTTTC
CGTCAAAACGCGGGCAGATGATGACGCGGCAAACCTTTTGGCATCGGATTAAGCTGTATGCCCTGCGTGCTGGGATTGAA
ACCGCATTATCACCGCACACATTGCGCCATGCTTTTGCTACCCATTTGCTCAATCACGGTGCCGATCTGCGGGTAGTGCA
ATTGCTGTTAGGCCATAGCGACCTGTCGACCACGCAGATTTATACCCATGTGGCGCGGGCAAGGTTGCAGGAATTGCATC
AACAGCATCATCCAAGAGGCTGA

Protein sequence :
MPKTYQPDPLIDVFLDDLWSNKGLSDNTLSAYRTDLRHFDRYQAQQGVTLLSVSQADVRAYLAFRVEQDFARTSSARLLS
SLRRFYTYLVQTKQISADPMALVESPKLTRHLPDSLSESQVDRLLSEPNVEDAVECRDKAMLELLYATGLRVSELVGLTM
EQMSLRQGLVRIVGKGGKERLVPLGELAITEVESYMKFARQELLGNKQSDVVFPSKRGQMMTRQTFWHRIKLYALRAGIE
TALSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVARARLQELHQQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-56 58
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-56 58