Gene Information

Name : Sbal678_0358 (Sbal678_0358)
Accession : YP_005271610.1
Strain : Shewanella baltica OS678
Genome accession: NC_016901
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 396163 - 398238 bp
Length : 2076 bp
Strand : -
Note : TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: shw:Sputw3181_0304 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase

DNA sequence :
TTGCAGCAATTGGATCTTGTTCCGATCACCGACCTCAAAGGCGTCGCCAAAAAGGTCGCGGAGAAACTCGCAAAGCTCGG
CATCACAACAGTACAAGACCTGCTGTTTCACTTACCCCTGCGCTACGAAGACAGAACCCAAATCTATCCGATTGCCGCCC
TTATGCCCGGCAGTTACGGCACCATAGAGGCTGAAATCCAATCGACGCAAATCATCCAAGGCCGCAAGCGTATGCTGGTC
TGCAATGTGCGCGACGATACGGGCAGCTTGAGCCTGCGCTTTTTCAACTTTTCTGTCGCCCAGCGTAATGCCATGCAAAA
TGGTTTAATGATCCGCGCCTACGGTGAAGTGCGCCGTGGCGGCCATCAAGCTGAGATAGTGCATCCAGAATATAAAGTCG
TGTATCCCGGTGAAGATGTTCACCTAAGCGATACCCTAACGCCGATTTATCCCACAACTGAGGGCTTAAAACAGGCGAGT
TGGCTCAAGCTGACCGAGCAAGCTTTGGTATTACTGGAAGATGGCGGCTTAACTGAGCTGCTGCCACCGCAGTTGCAACC
GAATAACATCAGCCTTAAACAAGCGTTGCAAACGCTGCATCGACCTCCTGCGGGGATCTCTCAGTTCGATTTAGAGTTAG
GTCAACACCCAGCCCAGCAGCGACTGGTGCAGGAAGAGTTACTCGCTCATAATCTCAGCATGCTACGCCTAAGGCAGCGC
AGTAATTTAGATGCAGCGGTGACCATGCAGGCCACGGGGCAATTGCTCAATCCCTTCCTTGCCGCTTTGCCCTTTAAACC
CACGGGCGCCCAGCAAAGAGTGGTGGCCGATATAGGCAAAGATTTAGAAAAACCGCACCCTATGATGCGCTTAGTACAAG
GGGATGTAGGTTCAGGTAAAACCTTAGTCGCGGCGATGGCTGCGCTGCAAGCGATTGAAAACGGTTATCAAGTTGCCATG
ATGGCGCCGACCGAGCTATTGGCCGAGCAACATGCAACTAACTTTGCCGCTTGGTTTGAGCCACTCGGGCTTAAAGTCGG
TTGGCTAGCCGGTAAACTTAAAGGCAAGGCAAGAGCGCAATCCCTTGCGGATATTGAATCCGGCGCAGCCCAAATGGTGA
TTGGCACCCATGCCATCTTCCAGCAGCATGTGGTCTTTAATAAACTCGGGTTAATTATCATAGATGAGCAGCACAGATTC
GGCGTACACCAACGCTTAGGTCTGCGGGAAAAGGGCGTGAGCCAAGGTTTCCATCCGCATCAATTGATCATGACGGCAAC
GCCGATCCCGCGCACGCTAGCGATGACAGCCTATGCGGATCTCGACACATCCATTATCGATGAACTGCCGCCGGGACGGA
CACCCGTGACCACAGTGGCGATTGCCGATTCTCGCCGCAACGAAGTGCTTGAACGGGTGCGTAACGCCGTCATCACAGAT
AAACGTCAGGCCTATTGGGTGTGTACTTTGATTGAAGAATCCGAAGTGCTCGAATGCCAAGCCGCCGAAGACACGGCCGA
AGAACTGCGCCTCGCCCTACCCGAGCTCAATATTGGCCTAGTGCATGGCAGGTTGAAGAGCGCTGAGAAACAACAAATCA
TGGCCGATTTTAAGGCGGGCATCATTCATCTTCTGGTGGCGACAACAGTGATTGAAGTGGGCGTCGATGTGCCTAATTCC
AGCCTGATGATCATTGAAAACCCTGAACGTTTAGGCTTAGCACAACTACACCAACTACGCGGACGAGTCGGCCGAGGCGC
CATCGCAAGCCATTGTGTGTTACTCTACAAGGCGCCATTGAGCCATACCGCCACCCAAAGACTGAGTGTACTCAGGCAAA
GTAATGACGGTTTCATCATAGCGCAGAAAGATTTAGAAATTCGTGGCCCAGGTGAAGTGCTTGGCACTAAGCAAACGGGA
CTGGCCGAGCTGAAAATTGCCGATCTGGTGCGCGATCAAGCTTTGATCCCGCACATTCAAAAACTGGCAAATCATGTGAT
GGCGCAGGCCCCCGAAAAAGTCGATGCGATAATCTTACGTTGGCTCGGGCACAAGCAGCACTATGTGCAGGCTTAG

Protein sequence :
MQQLDLVPITDLKGVAKKVAEKLAKLGITTVQDLLFHLPLRYEDRTQIYPIAALMPGSYGTIEAEIQSTQIIQGRKRMLV
CNVRDDTGSLSLRFFNFSVAQRNAMQNGLMIRAYGEVRRGGHQAEIVHPEYKVVYPGEDVHLSDTLTPIYPTTEGLKQAS
WLKLTEQALVLLEDGGLTELLPPQLQPNNISLKQALQTLHRPPAGISQFDLELGQHPAQQRLVQEELLAHNLSMLRLRQR
SNLDAAVTMQATGQLLNPFLAALPFKPTGAQQRVVADIGKDLEKPHPMMRLVQGDVGSGKTLVAAMAALQAIENGYQVAM
MAPTELLAEQHATNFAAWFEPLGLKVGWLAGKLKGKARAQSLADIESGAAQMVIGTHAIFQQHVVFNKLGLIIIDEQHRF
GVHQRLGLREKGVSQGFHPHQLIMTATPIPRTLAMTAYADLDTSIIDELPPGRTPVTTVAIADSRRNEVLERVRNAVITD
KRQAYWVCTLIEESEVLECQAAEDTAEELRLALPELNIGLVHGRLKSAEKQQIMADFKAGIIHLLVATTVIEVGVDVPNS
SLMIIENPERLGLAQLHQLRGRVGRGAIASHCVLLYKAPLSHTATQRLSVLRQSNDGFIIAQKDLEIRGPGEVLGTKQTG
LAELKIADLVRDQALIPHIQKLANHVMAQAPEKVDAIILRWLGHKQHYVQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 2e-101 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal678_0358 YP_005271610.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 59