Gene Information

Name : Sbal678_3310 (Sbal678_3310)
Accession : YP_005274504.1
Strain : Shewanella baltica OS678
Genome accession: NC_016901
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.193
Position : 3841570 - 3842724 bp
Length : 1155 bp
Strand : -
Note : TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: spc:Sputcn32_2778 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding

DNA sequence : 
ATGAGCTTGAACATAAGTTGGTCTGTACTCGATACACAAATGATGAGCCGCGCGATTCAATTAGCGCGCAAAGGCTTTTA
CACCACGAGACCCAATCCCTGTGTGGGCTGCGTTATCGTTAAAGATAACCAGATTGTTGGCGAAGGTTATCATCAAAAAG
CGGGTGAACCCCACGCCGAAGTGCATGCGCTACGTATGGCAGGTGAACACGCCCGCGGCGCAACGGCCTATGTCACCTTA
GAGCCCTGCAGCCATTATGGCCGCACGCCGCCCTGCGCCTTGGCGCTGATCAATATTGGCGTTAAACGTGTGGTGGTAGC
GGTTGAAGATCCTAATCCGCAAGTCGGTGGTCGCGGTATTCAAATGCTGCGCGACGCAGGTATTGAAGTGGATGTGGGAT
TACATCGCGATGAAGCCTATGCCTTGAATTTAGGCTTTATGAAGCGGATGGAATCGGGTTTACCCAGAGTTACAGTCAAA
TTGGCTGCGAGTCTTGATGGTAAAACCGCGCTGTCTAACGGTGTGTCTAAATGGATTACCGGGCCTGAATCTCGCCGCGA
CGTGCAGCGCTTACGCTTACGTTCCTGCGCGTTGGTGACTGGGATTGAAACCATACTGGCGGACGATCCCTCACTCAATG
TGCGATATCAAGAACTTGGTGGCTTGAAAGACAGCGTAACCGAGGCGCAATTACTGCAGCCGTTAAGAGTGATACTCGAC
AGTCGCGCCCGTTTGCCCTTATCGGCCGCATGTTTGGCTATCGTATCGCCGATACTCTTGGTCTCGACCGTGGCTTATCC
CGCAGAGTTTCAAGCACAATTGCCCTCCCATGTGAGTTGCCTCGTGTTACCTGCAATTGCAGGTCGCGTATCCTTACCTG
AACTATTAAGCTATTTAGGCCAAAGCTGTAATCACGTGCTAGTGGAAGCGGGTGCAACCTTAGCGGGCGCTTTTTTAGCA
GAGGGGCTGGCCGATGAATTAGTGCTGTACCAAGCGATGAAAATCCTCGGTGGGCAAGGGCGTAATCTATTGCAGCTACC
CGATTATCAAACCATGGCGCAAATTCCTGCATTAACTTTGGTCGATGAGCGCAAATTAGGGCCAGATACCCGTTTAATCT
TGAGCGTTAAGCTTGATACTTCTTTATTTAATTAA

Protein sequence : 
MSLNISWSVLDTQMMSRAIQLARKGFYTTRPNPCVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMAGEHARGATAYVTL
EPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRDAGIEVDVGLHRDEAYALNLGFMKRMESGLPRVTVK
LAASLDGKTALSNGVSKWITGPESRRDVQRLRLRSCALVTGIETILADDPSLNVRYQELGGLKDSVTEAQLLQPLRVILD
SRARLPLSAACLAIVSPILLVSTVAYPAEFQAQLPSHVSCLVLPAIAGRVSLPELLSYLGQSCNHVLVEAGATLAGAFLA
EGLADELVLYQAMKILGGQGRNLLQLPDYQTMAQIPALTLVDERKLGPDTRLILSVKLDTSLFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-70 51
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-70 51