Gene Information

Name : Sbal678_3030 (Sbal678_3030)
Accession : YP_005274230.1
Strain : Shewanella baltica OS678
Genome accession: NC_016901
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.22
Position : 3537510 - 3538676 bp
Length : 1167 bp
Strand : -
Note : TIGRFAM: nucleotide sugar dehydrogenase; KEGG: she:Shewmr4_1330 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase

DNA sequence :
ATGAAAATTGCTATTGCTGGTACAGGTTATGTCGGCCTCTCAAATGCTGTGTTATTAGCTCAGCACCATCAAGTTTTTGC
GGTTGATGTTATCGCTGATAAGGTTGCGTCAATTAACAATCGTAAGTCACCGATTATTGATGCCGAGATAGAAGATTTTT
TAACACATCGAGAGCTTAATTTAACTGCGACCTTGGATAAGCAACTTGCTTATCAAGATGCTGAATTTGTGATCATTGCG
ACGCCAACGGATTATGATCCAAAAACCAATTATTTTAATACTTCCTCTGTTGAGTCGGTTATTCAAGATGTTATTGGCAT
TAACCCTAATGCGGTGATGGTGATCAAATCTACCGTGCCAGTGGGCTTTACTGCCAAGGTTAAGCAAAAATATCATTGCG
ATAATATTCTCTTTTCGCCAGAGTTTTTGCGTGAGGGTCGGGCGCTTTACGACAATTTGCATCCATCGCGCATTATTGTT
GGTGAACGTAGTGAACGTGCTAAAGTGTTTGCCGATTTATTAGTGCAAGGCGCCATAAAAAAAGATATTCAAGTCTTATT
TACTGATAGCACTGAAGCTGAGGCAGTTAAATTATTTTCTAACACTTATCTTGCTATGCGTGTTGCTTATTTTAACGAAC
TTGATACTTATGCTGAAACTCATGGGCTAGATTCTCGGCAGATTATTGAGGGGGTGTGTTTAGATCCGCGAATTGGTGAT
CATTACAATAATCCTTCTTTTGGTTATGGTGGTTATTGCTTACCTAAAGATACCAAACAACTGCGAGCGAACTATGCCGA
TGTGCCTAATAGCATTATTGGTGCGATTGTGGAATCTAATACCACCCGTAAAGACTTTATCGCTGACTCTATTTTAAGCC
GTAATCCTAAGGTTGTCGGTATTTATCGGCTGATTATGAAGTCTGGTTCTGATAATTTTAGAGCCTCGAGTATTCAAGGG
ATTATGAAACGCCTCAAGGCTAAAGGTGTAGAGGTCATAGTGTATGAGCCAGTACTTAAAGAGAAAGAGTTCTTCCATTC
CCGTGTAGTTACCGATTTAACAGCCTTTAAAGTTGCTTCTGATGTGATTGTCTCAAACCGTATGGCCAAAGAACTGGCGG
ATGTTGCTGATAAGGTTTATACACGCGATCTGTTTGGGAGTGACTAA

Protein sequence :
MKIAIAGTGYVGLSNAVLLAQHHQVFAVDVIADKVASINNRKSPIIDAEIEDFLTHRELNLTATLDKQLAYQDAEFVIIA
TPTDYDPKTNYFNTSSVESVIQDVIGINPNAVMVIKSTVPVGFTAKVKQKYHCDNILFSPEFLREGRALYDNLHPSRIIV
GERSERAKVFADLLVQGAIKKDIQVLFTDSTEAEAVKLFSNTYLAMRVAYFNELDTYAETHGLDSRQIIEGVCLDPRIGD
HYNNPSFGYGGYCLPKDTKQLRANYADVPNSIIGAIVESNTTRKDFIADSILSRNPKVVGIYRLIMKSGSDNFRASSIQG
IMKRLKAKGVEVIVYEPVLKEKEFFHSRVVTDLTAFKVASDVIVSNRMAKELADVADKVYTRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 9e-97 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal678_3030 YP_005274230.1 nucleotide sugar dehydrogenase VFG0963 Protein 5e-101 55