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Name : Sbal678_2963 (Sbal678_2963) Accession : YP_005274164.1 Strain : Shewanella baltica OS678 Genome accession: NC_016901 Putative virulence/resistance : Virulence Product : two component, sigma54 specific, transcriptional regulator, Fis family Function : - COG functional category : - COG ID : - EC number : - Position : 3452571 - 3453950 bp Length : 1380 bp Strand : + Note : KEGG: shw:Sputw3181_1504 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA AT DNA sequence : ATGAGTGTGCCCAATTCCATCCAAGATTATTCTGTTCTCATCATCGACGATGAGCCACACATAGGCACAGTTCTCGTTCA GCTATTTGAACTTGAGGGCATTAAGGCGCTCGCCACCACAGAGCCTAAAGGGATCGCTAAGCACCTGCATAAAGATTGGG CGGGAATGGTGATATCAGATGTCAACATGCCGCAATTAGATGGCATCAGCTTAATGCAACAAATCCGCCTGCAGGACCCC GACCTCCCCGTTGTGTTATTGACAGGGTTTGGGGATATCGCCATGGCAGTCAATGCCTTAAAGCAAGGTGCCTACGACTT TCTCGAAAAGCCCTTTAATAACGAGCATATACTCGATGTGGTCAAGCGCGCCTTAGATAAACGCAGCCTGACCCTAGAGA ACCGTAAGCTTAAAAAGGATCTCGAAAGCCAGAGCGTACCGGGCCCTCGCATTTTGGGTAACAGCGTCGGCATCAACCGC ATGCGCCACATCATAGATCAAGTGATAGATACCCCCGCTGACGTGTTAATCGAGGGGGAAACAGGCACAGGTAAAGAGCT CGTCGCCCGCTATTTACACGATCACAGCAGCCGCAGCCAAGCCAACTTTGTCGCCATCAACTGTGGTGCGATCCCCGAAA ACTTAATTGAAAGTGAGCTCTTTGGCGCCGAAGCAGGTGCCTTTACCGGCGTCGATAAGATGCGCATTGGTAAGTTTGAA TACGCCAACGGCGGCACATTATTTTTAGATGAAATTGAAAGTACACCACTGTCGCTGCAGGTCAAACTTCTACGGGTACT TGAAGATCGTAAAGTTGAACGCTTAGGGTCAAACAAAAGCATCAGCCTTGATATACGGGTAATTGCCGCCACTAAGGTGG ATTTAAAAAGCTTGTGTGACACGGGGGAGTTTCGCCAAGACTTGTTGTATCGCTTAAATCTGGTGACTGTGCCTATCCCT CCCCTGCGGGATCGCCGTGAAGATATTCCTTTGCTGTTCCTGCACTTTGCCCGCGTCGCATCGGCACGCTATCACAAAGC GCTTATCGCCTTAAATGCCGAGCAAAACGCCATTCTCACCTCCCACGACTGGCCGGGCAATGTGCGTGAGTTACGTAATC TCGCCGAACGCTTTGTACTGCTGGGCGGAGAAGCCGCCTTTGCTGGCACTTTGGGCAATACCCCAAGCCTGCACTCGAGT ATGTCCTTACTACAACGAGTCGAGTTTTTTGAAAGGGTATTGATTGAAGAAGCGCTCAGCCACAACAAGGGCAGCATTAA GCAGACGATGGAGCAACTGGAACTGCCCCGTAAAACCCTCTACGACAAAATGCGAAAATACGATTTAGACCGCAAGCAGT ACATTAACTCCGAGGACTAG Protein sequence : MSVPNSIQDYSVLIIDDEPHIGTVLVQLFELEGIKALATTEPKGIAKHLHKDWAGMVISDVNMPQLDGISLMQQIRLQDP DLPVVLLTGFGDIAMAVNALKQGAYDFLEKPFNNEHILDVVKRALDKRSLTLENRKLKKDLESQSVPGPRILGNSVGINR MRHIIDQVIDTPADVLIEGETGTGKELVARYLHDHSSRSQANFVAINCGAIPENLIESELFGAEAGAFTGVDKMRIGKFE YANGGTLFLDEIESTPLSLQVKLLRVLEDRKVERLGSNKSISLDIRVIAATKVDLKSLCDTGEFRQDLLYRLNLVTVPIP PLRDRREDIPLLFLHFARVASARYHKALIALNAEQNAILTSHDWPGNVRELRNLAERFVLLGGEAAFAGTLGNTPSLHSS MSLLQRVEFFERVLIEEALSHNKGSIKQTMEQLELPRKTLYDKMRKYDLDRKQYINSED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | NP_791207.1 | type III transcriptional regulator HrpS | Virulence | Hrp PAI | Protein | 1e-52 | 41 |
| hrpS | AAC34753.1 | HrpS | Virulence | Hrp PAI | Protein | 2e-50 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sbal678_2963 | YP_005274164.1 | two component, sigma54 specific, transcriptional regulator, Fis family | VFG1249 | Protein | 7e-63 | 42 |
