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Name : Sbal678_2839 (Sbal678_2839) Accession : YP_005274040.1 Strain : Shewanella baltica OS678 Genome accession: NC_016901 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : 5.99.1.2 Position : 3317918 - 3320035 bp Length : 2118 bp Strand : - Note : SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; TIGRFAM: DNA topoisomerase III; KEGG: shw:Sputw3181_1573 DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM d DNA sequence : ATGATCCTCTATATCGCAGAAAAACCTAGCCTAGGGCGGGCCATTGCCGATGTATTGCCTAAACCCCATAAAAAAGGCGA TGGATTTATCGAAGCCGCCAATGGCGATTGCGTGTCTTGGTGCGTAGGTCACTTGCTCGAACAAGCAGAACCTGATGCCT ATAATCCCGAATTTAAGTCGTGGAAATTCGAGCACTTGCCAATAGTGCCGGACAAGTGGCAACTAAAACCTAAGGCCGCA ACTCGCAGCCAACTCACAGTGCTGAAACGATTAGTCAAACAAGCTAACACGCTGGTTAATGCAGGCGATCCCGATCGTGA AGGGCAATTACTCGTGGATGAAGTGATTGCCTATCTTGGCGTGACGGGTGATAAGTTACATCAAACTCAGCGTTTACTGA TCAGCGACTTAAACCCACAAGCCGTAAAACGGGCGCTAACACAGCTACGCAGTAATCGCGAGTTTATTCCTTTGTCCACA TCGGCCTTAGCCCGTAGCCGCGCCGATTGGCTCTACGGCATGAATATGACCCGCGCTTATACTATCCAAGGTAAAAAGGT TGGTTATCAAGGCGTATTGTCCGTCGGGCGAGTGCAAACGCCTTTACTCGGGCTAGTGGTGCGCCGTGATGAAGAGATTG CCAATTTTCAATCTAAACCTTTCTATGAAGTGCTAGCGCATTTGGCGACTGAAAAGCAGGAAACCTTCAGCGCTAAGTGG CAACCCAGCGAAGCTTGTCAGCCGTACATGGACGAAGAAGGGCGAGTACTAGCCAGAGGGTTAGCGCAAAATGTGGTGAG TCGCATCAGTGATAAACCCGCCTTAGTGACTCAATTAGTGGCTAAGGACAAGAAACAGAATCCGCCATTGCCCTACAGCT TATCCGCGTTGCAGATTGATGCGGCAAAACGGTTTGGAATGAGTGCTAAGGATGTTCTTGATACCTGCCAGAGTTTGTAT GAGCGCCATAAACTCATTACCTATCCCCGTTCCGACAGCCGTTATTTACCCGTCGAGCAACATAGCCTAGCGCCGTCGGT TCTTAAGGCGATTCGTAGCGGTGCCGCTGAGTTACTGCAAGGCGCCGATGCCCCCGATCCACGGCTTAAATCCAAGGCAT GGGATGATAAAAAAGTGGATGCCCACCACGCCATCGTTCCTACCGAGAAAACGGCTAACTTATCCAGCTTAAGTCAGCGT GAGAGGCAGTTATATCTTCATGTTGCCCGCCAGTACTTAGCCCAGTTTTATCCGGCCTATTGTTACAGTGAAACCACGGT ACAAGTGACAATTGAGGGCGGCTTATTTAATACCAAGGCGCGTCAGGATAAATCCCTCGGCTGGAAGCAACTCTTTGCCC GCCAAGAGCCAAATGGTAGTAAGGCGAGTGGTAACAAGTCGACTGAAGAAAGCGCGGGTAAGGATGATGAGGAGAATGAC GAGTTTATCGGCCAATTACCACCTCTGAAACTAGGGCAGGCTTTGCATTGTACTCGAGGCGAGTTGCTGGAGAAAAATAC TCAGCCGCCAAAGGCCTTTACCGATGCCACTTTACTCGGTGCTATGACGGGGATTAGCCGCTACGTAACCGACCCTGAGA TCCGTAAAATTCTCAAAGAAACTGATGGCTTAGGTACAGAAGCTACCCGTGCAGGCATTATTGAACTATTGTTTAAACGC GGTTTTTTACAACGCTTAGGTAAATCTATCGTTTCGACGGATGTGGGTAAGGGATTAATTAACAGCTTACCCGCGAGTGC AACAACGCCTGACATGACAGCCCTTTGGGAAGCCAGCTTGAACGGTATTTGTCATAAAGAAACCTCCTATCAAGCCTTTA TGCAACCGCTGCTCGGCACTTTATCCACGCTTATTCAAAACGCAGGAGCACAACTGCCCACCGCGCTTAATGGTTTAAAA GGCCAAGGTTATCGTAAAACGGCTGGGAATAAATCTGGTTATCGCAAGTCGCCTTACCGTAAAGCCTCTAGCTCGACAAA ACGCACTGGCACGGCAAGTACCGCTAAAACAAGTACAACGACAAGTAGCAGTGCGAAAAAGTCGAGTGCGAGTTCAGGGA CTCGGAGTCGAACACGCAAAGTGGCTGCTGAGGTTTGA Protein sequence : MILYIAEKPSLGRAIADVLPKPHKKGDGFIEAANGDCVSWCVGHLLEQAEPDAYNPEFKSWKFEHLPIVPDKWQLKPKAA TRSQLTVLKRLVKQANTLVNAGDPDREGQLLVDEVIAYLGVTGDKLHQTQRLLISDLNPQAVKRALTQLRSNREFIPLST SALARSRADWLYGMNMTRAYTIQGKKVGYQGVLSVGRVQTPLLGLVVRRDEEIANFQSKPFYEVLAHLATEKQETFSAKW QPSEACQPYMDEEGRVLARGLAQNVVSRISDKPALVTQLVAKDKKQNPPLPYSLSALQIDAAKRFGMSAKDVLDTCQSLY ERHKLITYPRSDSRYLPVEQHSLAPSVLKAIRSGAAELLQGADAPDPRLKSKAWDDKKVDAHHAIVPTEKTANLSSLSQR ERQLYLHVARQYLAQFYPAYCYSETTVQVTIEGGLFNTKARQDKSLGWKQLFARQEPNGSKASGNKSTEESAGKDDEEND EFIGQLPPLKLGQALHCTRGELLEKNTQPPKAFTDATLLGAMTGISRYVTDPEIRKILKETDGLGTEATRAGIIELLFKR GFLQRLGKSIVSTDVGKGLINSLPASATTPDMTALWEASLNGICHKETSYQAFMQPLLGTLSTLIQNAGAQLPTALNGLK GQGYRKTAGNKSGYRKSPYRKASSSTKRTGTASTAKTSTTTSSSAKKSSASSGTRSRTRKVAAEV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 1e-101 | 41 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 1e-102 | 41 |
