Gene Information

Name : Sbal678_2458 (Sbal678_2458)
Accession : YP_005273662.1
Strain : Shewanella baltica OS678
Genome accession: NC_016901
Putative virulence/resistance : Unknown
Product : DNA-directed DNA polymerase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.7
Position : 2857719 - 2858993 bp
Length : 1275 bp
Strand : +
Note : KEGG: shw:Sputw3181_1082 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein

DNA sequence :
ATGACGCCCTCACTATTCGCACTCGTCGATTGCAATAATTTTTATGCATCCTGTGAGCGGATGTTTAGGCCAGATTTAGC
TGGCAGGCCGATTGTAGTGTTATCCAACAACGATGGCTGCGTCGTCGCCCGCTCGGCAGAGGCAAAACAACTTGGCATCA
AAATGGCGGTGCCTGTGTATCAAATCGCAAACCAACTCCGCCAGCATCACATCGCGGTATTCTCCTCCAACTATGCACTC
TATGCCGACATATCAAATAGAGTCATGACCACCTTAGAGCAAATGGTACCGAAAGTAGAAGTGTATAGTATTGATGAAGC
GTTTTTAGATCTTTCTCGTCTCGATAAATGCATTGATATTCATCAGCTTGCACTTGATATTTATCAACGAATACCACAGT
GGATTGGGATCAGTATTTGCGTCGGCATTGGACCGACAAAAACTCTCGCTAAACTGGCAAACCATGCCGCGAAACGTTAT
CCCGCGACGCGGGGAGTGGTTGACTTGCGCGACCGTGAACGCCAACGACGGCTGATGGCGCTTATCCCTGTCGACGAAGT
CTGGGGAATAGGCCGTAGGCTTACAAAACGCTTGAACATCATGGGCATAAATACCGCGTTGCAATTGGCGGATGCGCATC
CAAAGCTTATCCGCGACACCTTTTCTGTCACCGTTGAGCGCACGGTACGCGAACTTAACGGCATTGCCTGTGATGACATA
CAAGAGGTCGCCGCCACTAAGCAACAAATTATCAGCTCCCGATCCTTTGGCAGCCGTATTGATAATTTAGAAGCGATGCA
ACAGGCAATCAATGAATACACTTTTAGGGCCTGTGAAAAACTGCGCTCCGAGCGCCAGTACGCTAAAGCAATGTCGGTAT
TTGTCCGTACTAGCCCTTTTAGCGATGCAACTCCCCAGTACAGCAAATCGCTGTCGGGCAGTTTAGTTCGCCCCAGCAAT
GATACGCGTGATTTTGTCACCCTTGGCCAAAGCCTACTGCAACGCATTTGGCGTGAAGGTCATGCCTATGCAAAGGCCGG
TGTCATGTTAGGGGATTTTTTTGGTGCAGGCGTGTTTCAGCTCGGATTATTCGATGACGTCACGCCTAGACCTAAAAGCA
AGGAGTTAATGCAATTACTCGATAAAGTTAACCACAGCGGTCATGGAAAAATTTGGTTTGCAGGACAAGGTATTGACCCC
ACTTGGGGAATGAAGCGTGAGCAGCTTTCCCCTCGTTACACCACCCAATGGGCACAATTACCCATAGTGAAATAA

Protein sequence :
MTPSLFALVDCNNFYASCERMFRPDLAGRPIVVLSNNDGCVVARSAEAKQLGIKMAVPVYQIANQLRQHHIAVFSSNYAL
YADISNRVMTTLEQMVPKVEVYSIDEAFLDLSRLDKCIDIHQLALDIYQRIPQWIGISICVGIGPTKTLAKLANHAAKRY
PATRGVVDLRDRERQRRLMALIPVDEVWGIGRRLTKRLNIMGINTALQLADAHPKLIRDTFSVTVERTVRELNGIACDDI
QEVAATKQQIISSRSFGSRIDNLEAMQQAINEYTFRACEKLRSERQYAKAMSVFVRTSPFSDATPQYSKSLSGSLVRPSN
DTRDFVTLGQSLLQRIWREGHAYAKAGVMLGDFFGAGVFQLGLFDDVTPRPKSKELMQLLDKVNHSGHGKIWFAGQGIDP
TWGMKREQLSPRYTTQWAQLPIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
umuC NP_807889.1 DNA polymerase V subunit UmuC Not tested SPI-7 Protein 1e-112 55
samB NP_458681.1 UV protection protein Not tested SPI-7 Protein 1e-112 55
rulB CAI36137.1 nucleotidyltransferase/DNA polymerase Not tested PPHGI-1 Protein 7e-80 46
unnamed ABR13403.1 DNA-directed DNA polymerase Not tested PAGI-5 Protein 9e-64 42