|
Name : Sbal678_2458 (Sbal678_2458) Accession : YP_005273662.1 Strain : Shewanella baltica OS678 Genome accession: NC_016901 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : - COG ID : - EC number : 2.7.7.7 Position : 2857719 - 2858993 bp Length : 1275 bp Strand : + Note : KEGG: shw:Sputw3181_1082 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein DNA sequence : ATGACGCCCTCACTATTCGCACTCGTCGATTGCAATAATTTTTATGCATCCTGTGAGCGGATGTTTAGGCCAGATTTAGC TGGCAGGCCGATTGTAGTGTTATCCAACAACGATGGCTGCGTCGTCGCCCGCTCGGCAGAGGCAAAACAACTTGGCATCA AAATGGCGGTGCCTGTGTATCAAATCGCAAACCAACTCCGCCAGCATCACATCGCGGTATTCTCCTCCAACTATGCACTC TATGCCGACATATCAAATAGAGTCATGACCACCTTAGAGCAAATGGTACCGAAAGTAGAAGTGTATAGTATTGATGAAGC GTTTTTAGATCTTTCTCGTCTCGATAAATGCATTGATATTCATCAGCTTGCACTTGATATTTATCAACGAATACCACAGT GGATTGGGATCAGTATTTGCGTCGGCATTGGACCGACAAAAACTCTCGCTAAACTGGCAAACCATGCCGCGAAACGTTAT CCCGCGACGCGGGGAGTGGTTGACTTGCGCGACCGTGAACGCCAACGACGGCTGATGGCGCTTATCCCTGTCGACGAAGT CTGGGGAATAGGCCGTAGGCTTACAAAACGCTTGAACATCATGGGCATAAATACCGCGTTGCAATTGGCGGATGCGCATC CAAAGCTTATCCGCGACACCTTTTCTGTCACCGTTGAGCGCACGGTACGCGAACTTAACGGCATTGCCTGTGATGACATA CAAGAGGTCGCCGCCACTAAGCAACAAATTATCAGCTCCCGATCCTTTGGCAGCCGTATTGATAATTTAGAAGCGATGCA ACAGGCAATCAATGAATACACTTTTAGGGCCTGTGAAAAACTGCGCTCCGAGCGCCAGTACGCTAAAGCAATGTCGGTAT TTGTCCGTACTAGCCCTTTTAGCGATGCAACTCCCCAGTACAGCAAATCGCTGTCGGGCAGTTTAGTTCGCCCCAGCAAT GATACGCGTGATTTTGTCACCCTTGGCCAAAGCCTACTGCAACGCATTTGGCGTGAAGGTCATGCCTATGCAAAGGCCGG TGTCATGTTAGGGGATTTTTTTGGTGCAGGCGTGTTTCAGCTCGGATTATTCGATGACGTCACGCCTAGACCTAAAAGCA AGGAGTTAATGCAATTACTCGATAAAGTTAACCACAGCGGTCATGGAAAAATTTGGTTTGCAGGACAAGGTATTGACCCC ACTTGGGGAATGAAGCGTGAGCAGCTTTCCCCTCGTTACACCACCCAATGGGCACAATTACCCATAGTGAAATAA Protein sequence : MTPSLFALVDCNNFYASCERMFRPDLAGRPIVVLSNNDGCVVARSAEAKQLGIKMAVPVYQIANQLRQHHIAVFSSNYAL YADISNRVMTTLEQMVPKVEVYSIDEAFLDLSRLDKCIDIHQLALDIYQRIPQWIGISICVGIGPTKTLAKLANHAAKRY PATRGVVDLRDRERQRRLMALIPVDEVWGIGRRLTKRLNIMGINTALQLADAHPKLIRDTFSVTVERTVRELNGIACDDI QEVAATKQQIISSRSFGSRIDNLEAMQQAINEYTFRACEKLRSERQYAKAMSVFVRTSPFSDATPQYSKSLSGSLVRPSN DTRDFVTLGQSLLQRIWREGHAYAKAGVMLGDFFGAGVFQLGLFDDVTPRPKSKELMQLLDKVNHSGHGKIWFAGQGIDP TWGMKREQLSPRYTTQWAQLPIVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 1e-112 | 55 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 1e-112 | 55 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 7e-80 | 46 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 9e-64 | 42 |
