Gene Information

Name : Sbal678_2440 (Sbal678_2440)
Accession : YP_005273644.1
Strain : Shewanella baltica OS678
Genome accession: NC_016901
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2833272 - 2835395 bp
Length : 2124 bp
Strand : -
Note : KEGG: spc:Sputcn32_1922 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGTCCAGTTCAAACCAAAACCCAGCTGTAGCTGCCAATGCGATAGAAATCACTGCGCCAGAATCGACAATCCCTAATAA
ATCGACAGTGGCTAATAAATCGGCTGAGTCTAGTCAATCAATCGTGCCTAAGGCGCCGAGTCGCCGCGAAACCCGCGCGC
AGGCTCAAGCCTTTATCGATACGTTAGCGCCGCTGCAACATCCTAATTCACAAAAGATTTATCTCGAAGGTTCCAGTGCC
GATATTCGCGTTGGCATGCGGCAAATTCTGCAGACTGACACGCTTGTCGGCGGTACAGATGATGCGCCAATCATGGAAAA
AAATCCGCCAATCCGCGTGTATGATTGCGCTGGACCTTATTCCGATCCTGAGGCCGACATCAATGTGCGTCTAGGCCTTG
GTAAATTAAGACAAAACTGGATCCTAGCCCGCAACGATACAGAGCAATTACCCTGCGCGACCTCAGATTTTACCCAACAA
AGACTCGCTGACGACGGTTTAGACCATCTGCGTTTTGAGGTGGGCTCGAGTGCCATTGTCCGCCCACGCAGAGCGCTGCA
GGGCAAACGAGTTAGTCAATTACACTATGCCCGTCAAGGGATTATCACGCCCGAAATGGAATATGTGGCGATCCGCGAGA
ACATGGCACTTGCGCAAGTACAGGATGAAATCCTCAATCGTAAAGCCAAGGGCGAAGCTTTTGGTGCCTTAGTCGGCGAA
CCGATTACCGCCGAATTTGTCCGCGCCGAAGTTGCCCGTGGCCGCGCGATTATTCCGCTGAATATTAACCATCCCGAAGC
CGAACCTATGATTATCGGGCGTAATTTTCTGGTGAAAGTGAACGCCAATATCGGTAACTCGGCGGTGACGTCTTCCATCG
AGGAAGAAGTGGAAAAGCTTGTCTGGTCAACCCGTTGGGGGGCAGATACTGTCATGGATTTATCCACGGGTCGTTATATT
CACGAAACCCGCGAGTGGATCATCCGCAACTCACCAGTGCCCATCGGCACAGTGCCGATTTATCAAGCGCTGGAGAAAGT
GAACGGCGTGGCAGAGGATTTAACCTGGGAAGTGTTCCGCGATACCTTGATTGAACAAGCTGAGCAAGGTGTTGATTACT
TTACTATTCATGCTGGTGTGCTGCTGCGTTATGTGCCGATGACGGCTAAACGTGTTACTGGGATCGTTTCTCGCGGCGGT
TCAATTATGGCCAAATGGTGCCTGAGTCATCACAAGGAAAACTTCCTCTACAGCCATTTTCGTGAGATCTGTGAGCTTTG
CGTCGCCTACGATGTATCCCTGTCTTTAGGTGATGGTATGCGTCCCGGATCGATTGCCGACGCTAATGATGCTGCCCAGT
TTGCAGAGCTTGAAACCTTAGGTGAGCTAGTCAAAATCGCGTGGGAATACGACGTACAAACCATTATCGAAGGGCCGGGA
CATATCCCGATGCAGCTCATTAAAGAGAACATGGACAAGCAGTTAGCTCACTGCGATGAGGCGCCGTTTTACACGCTTGG
CCCGCAAATCACTGATATCGCACCTGGGTATGATCATTTCACCTCCGGCATAGGCGCGGCCATGATTGCTTGGTACGGCT
GCGCTATGTTGTGTTATGTCACGCCAAAAGAACACTTAGGATTACCGAATAAACAAGATGTTAAGCAAGGTTTGATTGCT
TATAAGATTGCCGCCCACGCCGCCGATGTGGCGAAAGGTCATCCGAGTGCGCAAATTCGTGATAATGCGCTGGCAAAGGC
GCGGTTCGAATTCCGCTGGGAAGATCAATATAACTTAGGACTCGATCCTGAAACCGCACGTGCTTATCACGATGAATCTT
TACCGCAGGAATCCGCTAAAGTCGCGCATTTTTGCTCTATGTGCGGCCCTAAATTTTGTTCGATGAAAATCACCCAAGAT
GTGCGCGCCTATGCCGCTGGCTTAGAGGCGGCACAAGCGAAGGCGGAGCAAGTTGAAGCGGCTGCCCAAGCCATGCAAGT
CACAGTCAAGACGCCGCAGGAGTTGGAAGCGGCAATGGCGCTAAAATCGGCAGAGTTTGCTGCTTCGGGCGCCGAGATCT
ATCACGTGAAAGACAAGCTTGTCGCCGAAGCTGAGGAAGCCTAA

Protein sequence :
MSSSNQNPAVAANAIEITAPESTIPNKSTVANKSAESSQSIVPKAPSRRETRAQAQAFIDTLAPLQHPNSQKIYLEGSSA
DIRVGMRQILQTDTLVGGTDDAPIMEKNPPIRVYDCAGPYSDPEADINVRLGLGKLRQNWILARNDTEQLPCATSDFTQQ
RLADDGLDHLRFEVGSSAIVRPRRALQGKRVSQLHYARQGIITPEMEYVAIRENMALAQVQDEILNRKAKGEAFGALVGE
PITAEFVRAEVARGRAIIPLNINHPEAEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYI
HETREWIIRNSPVPIGTVPIYQALEKVNGVAEDLTWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGG
SIMAKWCLSHHKENFLYSHFREICELCVAYDVSLSLGDGMRPGSIADANDAAQFAELETLGELVKIAWEYDVQTIIEGPG
HIPMQLIKENMDKQLAHCDEAPFYTLGPQITDIAPGYDHFTSGIGAAMIAWYGCAMLCYVTPKEHLGLPNKQDVKQGLIA
YKIAAHAADVAKGHPSAQIRDNALAKARFEFRWEDQYNLGLDPETARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQD
VRAYAAGLEAAQAKAEQVEAAAQAMQVTVKTPQELEAAMALKSAEFAASGAEIYHVKDKLVAEAEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 71
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 71
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 68