Name : Sbal678_2290 (Sbal678_2290) Accession : YP_005273497.1 Strain : Shewanella baltica OS678 Genome accession: NC_016901 Putative virulence/resistance : Virulence Product : type III secretion protein SpaR/YscT/HrcT Function : - COG functional category : - COG ID : - EC number : - Position : 2661971 - 2662771 bp Length : 801 bp Strand : + Note : KEGG: svo:SVI_2228 type III secretion system apparatus protein, SpaR/YscT family; TIGRFAM: type III secretion protein SpaR/YscT/HrcT; PFAM: type III secretion system inner membrane R protein DNA sequence : ATGACAACTCAGCTACCCAACCTATTAACAGCACAACTTCCGGTGTTGGCACTCTGTATGATGCGCCCTTTAGGCATGAT GCTGCTATTACCCTTATTTAAAGGGGGGGCAATGGGGAGCGCATTAATTCGTAATAGTCTGATTTTAATGTTTGCTTTAC CTACTGTGCTGGCAATGGATGAAATGCAGCCGATACTGCAGCAGGCCGACACTTGGATGCTCATCAGCCTATTTGGCAAA GAAATTATTGTAGGCATGTTACTCGGTTTCTGTGCCGCCATTCCCTTTTGGGCCATAGATATGGCGGGATTTGTAATTGA CACAATGCGGGGGGCATCCATGTCGACTGTACTTAACCCATTGATGGGACTGCAATCATCGATTTATGGCATGCTGTTTA CTCAAGTTCTTACTGTGCTGTTTTTAGTCTCGGGTGGTTTTAATTTTCTGCTAACTGCACTTTATCAGTCATATCAACAA TTACCCCCAGGATTTAATTTAACGCTAAGCCAGCCCTTGATGGTGTTTATAGCCCATGAGTGGCAATTGATGTGCCAACT ATGTCTCAGTTTTGCCATGCCCGCCATGGTGATTATGATCTTAGTCGATGTAGCCTTAGGGCTAGTAAACCGCTCGGCGC AGCAGTTAAACGTCTTCTTTTTGTCTATGCCCATTAAAAGCGCTTTGGTCTTACTGTTATTGATCTACAGCTTACAGTTT GCTTTGTCCCATTACCTGCAGACCATTTCTGGGGTAGAGCAGCACGTAGATATTTTGTTTGGACTCTTAGCAGGGCACTA G Protein sequence : MTTQLPNLLTAQLPVLALCMMRPLGMMLLLPLFKGGAMGSALIRNSLILMFALPTVLAMDEMQPILQQADTWMLISLFGK EIIVGMLLGFCAAIPFWAIDMAGFVIDTMRGASMSTVLNPLMGLQSSIYGMLFTQVLTVLFLVSGGFNFLLTALYQSYQQ LPPGFNLTLSQPLMVFIAHEWQLMCQLCLSFAMPAMVIMILVDVALGLVNRSAQQLNVFFLSMPIKSALVLLLLIYSLQF ALSHYLQTISGVEQHVDILFGLLAGH |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
YPO0272 | YP_002345354.1 | type III secretion apparatus protein | Virulence | Not named | Protein | 3e-43 | 53 |
ssaT | YP_216429.1 | secretion system apparatus protein SsaT | Virulence | SPI-2 | Protein | 3e-40 | 50 |
ssaT | CAA68201.1 | secretion system apparatus, SsaT | Virulence | SPI-2 | Protein | 4e-39 | 49 |
ssaT | NP_460386.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 5e-39 | 49 |
ssaT | NP_456107.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 5e-40 | 49 |
ssaT | NP_805092.1 | type III secretion protein | Virulence | SPI-2 | Protein | 5e-40 | 49 |
lscT | AAO18038.1 | LscT | Virulence | TTSS locus | Protein | 5e-19 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Sbal678_2290 | YP_005273497.1 | type III secretion protein SpaR/YscT/HrcT | VFG0521 | Protein | 2e-39 | 49 |