Name : Sbal678_2273 (Sbal678_2273) Accession : YP_005273480.1 Strain : Shewanella baltica OS678 Genome accession: NC_016901 Putative virulence/resistance : Virulence Product : type III secretion system needle protein Function : - COG functional category : - COG ID : - EC number : - Position : 2646510 - 2646725 bp Length : 216 bp Strand : + Note : KEGG: svo:SVI_2244 type III secretion system apparatus protein, putative; TIGRFAM: type III secretion system needle protein; PFAM: Type III secretion, needle-protein like DNA sequence : ATGGACTTAAGTGCCATAGTTAATCAATTGTCTCAGCTATCGACGCGCTCAGCTCAAGAGGTACAGGCCAAGATGTCTGC AGGCGATTTGACCGATCCCGACAAGATGATCAAAGCCCAATTTGCCATGCAGCAATACTCTAACTTTGTCGGCTATGAGA GTGCCATGATAAAAGCGATTAAAGACATGATCCAAGGGATCATTTCTAAGATTTAA Protein sequence : MDLSAIVNQLSQLSTRSAQEVQAKMSAGDLTDPDKMIKAQFAMQQYSNFVGYESAMIKAIKDMIQGIISKI |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
ssaH | AAC28874.1 | SsaH | Virulence | SPI-2 | Protein | 2e-17 | 53 |
ssaG | CAA12193.1 | SsaG | Virulence | SPI-2 | Protein | 2e-17 | 53 |
ssaG | NP_456122.1 | putative pathogenicity island protein | Virulence | SPI-2 | Protein | 3e-17 | 53 |
ssaG | NP_805077.1 | pathogenicity island protein | Virulence | SPI-2 | Protein | 3e-17 | 53 |
ssaG | NP_460371.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 3e-17 | 53 |
ssaG | YP_216414.1 | secretion system apparatus protein SsaG | Virulence | SPI-2 | Protein | 6e-17 | 53 |
escF | AFO66347.1 | putative LEE-encoded type III secretion system structural component | Not tested | SESS LEE | Protein | 3e-10 | 41 |
escF | AFO66385.1 | putative LEE-encoded type III secretion system structural component | Virulence | SESS LEE | Protein | 3e-10 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Sbal678_2273 | YP_005273480.1 | type III secretion system needle protein | VFG0507 | Protein | 1e-17 | 53 |