Gene Information

Name : Sbal678_2255 (Sbal678_2255)
Accession : YP_005273462.1
Strain : Shewanella baltica OS678
Genome accession: NC_016901
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, LuxR family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2629388 - 2630032 bp
Length : 645 bp
Strand : +
Note : KEGG: svo:SVI_2263 transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR

DNA sequence : 
ATGGCATTTAGTCATGGAAAAGTGATCAATATTTTAGTGGTCGATGATCATTCGTTGATTTTTGATGGATTACGGGGCTG
TTTAGCGCCTTATCCTGAACTTAATCTGATTGGCTCGGTTGAAGATGGGCTTGCGGTATACGAGAAATGTCTCAAACTCA
GGCCAGATCTGGTCTTTATGGATCTTAAATTACCCGGAATGGGTGGATTGGACGTGATCCGTCAGCTCAGACAACGTTGG
CCAGAGATGATGATTATTATGTTAACGGGGACGATTGAGGAAAAAAGTGCACGGGAAGCGCTTGATGTAGGCGCCAATGG
TTATGTATTAAAAAATAGCCCTAAGAGCACACTATTAGCGGCAATTAAGTGTGTGAGTAAGGGCAAAAATTTTATCGATC
CTAGTTTAGATGAGCAGCAAATAGACGCTTTGAGTGGAGTGGTCGATGGGGATATCCCTTTGCTGACCCCCCGTGAGCAA
CAAGTGCTAAAACTGATCTGTGAGGGGCGCCGCAACCGTGATATTGCCGAAGATTTAGTGATTGGTTTAAAAACGGTTGA
GACTCACAGGATGAATTTAATGCGCAAACTTAATGCGCATAACGTCGCCGAGTTAATGCATTGGGTACAAAGGCTTGGAT
TATGA

Protein sequence : 
MAFSHGKVINILVVDDHSLIFDGLRGCLAPYPELNLIGSVEDGLAVYEKCLKLRPDLVFMDLKLPGMGGLDVIRQLRQRW
PEMMIIMLTGTIEEKSAREALDVGANGYVLKNSPKSTLLAAIKCVSKGKNFIDPSLDEQQIDALSGVVDGDIPLLTPREQ
QVLKLICEGRRNRDIAEDLVIGLKTVETHRMNLMRKLNAHNVAELMHWVQRLGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0255 YP_002345335.1 two-component response regulator Not tested Not named Protein 1e-48 53
ssrB CAB09344.1 SsrB Virulence SPI-2 Protein 1e-36 49
ssrB YP_216399.1 secretion system transcriptonal activator Virulence SPI-2 Protein 2e-40 48
ssrB NP_456137.1 putative two-component response regulator Virulence SPI-2 Protein 1e-40 48
ssrB NP_805062.1 two-component response regulator Virulence SPI-2 Protein 1e-40 48
ssrB NP_460356.1 transcriptional activator Virulence SPI-2 Protein 1e-40 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal678_2255 YP_005273462.1 two component transcriptional regulator, LuxR family VFG0492 Protein 3e-41 48