Gene Information

Name : Sbal678_1779 (Sbal678_1779)
Accession : YP_005272998.1
Strain : Shewanella baltica OS678
Genome accession: NC_016901
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2087884 - 2088693 bp
Length : 810 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: son:SO_A0091 ISSod1, transposase OrfB

DNA sequence :
ATGAGTGTCAGTAAGTCAGGCTATTACGATTGGCATAAACGCCCTGCAAACGTGATAAGCCTTGAAACACTGAAGCTTTA
TCGCCTTGTTCGACAGCTATTTAAGCAAAGTCGAGGCAGCTTAGGGAATCGTGAAATGGTGAAGAAATTGCGCAAGGAAG
GCTACCAGGTTGGTCGCTATCTCGTTCGTAAAATTATGCACCGCCTTCGACTCAAAGTAACCCAGCGATGTGCTTACAAG
GTGACGACACAGCGAAAACACTCAGATGCAGTGGCTGATAACCTGTTAAACATGAACTTTAATCCAGTATCGGCTAATCA
GGTCTGGGCGAGTGACGTGACCTATTTAAAGACGGGTGAAGGCTGGATGTACTTAGCTGTGGTGATGGATTTATATTCAC
GCCGGATTGTGGGATGGCACATAGACAAACGCATGACCACAGATTTGATATCCAAGGCATTAATAAAAGCCTACAACCTG
CGCCAACCGGCCAGAGGGTTGGTATTTCACAGTGACCGAGGCTCGCAATATACCAGTAAGCAATTCGGTAGGCTGCTATC
GAGCTATGGTATCCGAGCCAGCATGGGTGATGTGGGTGCGTGTTGGGATAATGCCGTTGTTGAGCGTTTCTTTGGTAGCT
TGAAACACGATTGGATTTTTAAAGTTAATCAACCAACAAGGGAGTTTATGAAGCAAGATGTGACGGCTTACATGAAATAT
TACAACTTGGAGCGGCTTCATTCTGCTAATGACGCTCTGTCACCTGTAGAGTTTGAAAATTCTCAACTAAAAGTGTCCAG
TTTGGGTTGA

Protein sequence :
MSVSKSGYYDWHKRPANVISLETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRYLVRKIMHRLRLKVTQRCAYK
VTTQRKHSDAVADNLLNMNFNPVSANQVWASDVTYLKTGEGWMYLAVVMDLYSRRIVGWHIDKRMTTDLISKALIKAYNL
RQPARGLVFHSDRGSQYTSKQFGRLLSSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVNQPTREFMKQDVTAYMKY
YNLERLHSANDALSPVEFENSQLKVSSLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 9e-37 42
tnpB CAB61574.1 transposase B Not tested HPI Protein 6e-37 42