Gene Information

Name : Sbal678_1685 (Sbal678_1685)
Accession : YP_005272909.1
Strain : Shewanella baltica OS678
Genome accession: NC_016901
Putative virulence/resistance : Resistance
Product : methionine gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1987133 - 1988326 bp
Length : 1194 bp
Strand : +
Note : KEGG: shw:Sputw3181_2594 methionine gamma-lyase; TIGRFAM: methionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein

DNA sequence :
ATGCAAGATGAGTCAGGCAAGATGTGGAAAGCGGCAACACAGGTTATTCATGGCGGTCATGAGCGTGAGGCCTTTGGCGC
CTTAGTGACGCCGCTATATCAAAGTGCGACTTTTGTGTTTGAGTCCGCACAGCAAGGTGGTGAGCGATTTGCGGGTAATG
AGCCGGGGTATATTTACACGCGCTTAGGTAATCCGACAACCGCCGAGCTTGAACGTAAAATGGCGATTTTAGAAGGTGCA
GAGGCCGCCGCTGCAACCGCATCTGGTATGGGCGCAGTATCCGCCGCATTACTGGCTAACTTGCAGATGGGCGATCACTT
AGTGGCATCCAATGCCGTATACGGTTGTACTTATGCGCTAATGACGACTCAGTTCGCTCGCTTTGGTATTGAAGTGTCCC
TAGTGGACTTTTCATCGGTAGCAGAAATAGAAGCGGCGATTAAATCCAATACTAAGGTCATTTTCTGTGAAACCCCAGTG
AATCCCCATTTACAGGTGTTTGATTTGGCAGCAATTGCGACTATTGCCAAACGTCATCAGTTGGTCAGTATTGTCGATAA
CACTTTTATGACGCCATTACTGCAGAGACCGCTGGATTTTGGTATCGATTTGGTGATCCACAGTGCGACTAAATATCTGA
ATGGTCATGGCGATGTGATTGCGGGGATAGTGTGTGGCAGCGAAGAACAGCTCCATAAAGTGAAGTATGAAATCTTAAAA
GATATTGGCGCTGTGATATCGCCACATGATGCTTGGCTGATCTTGCGCGGCCTTAAAACCTTAGATGTACGTTTACAGCG
CCATTGCGATAGTGCCCAGCGAGTGGCCGAGTTTTTGGCCGAACATCCCAGTATTAACCGCGTGTATTATCCTGGACTTG
CCTCTCACCCAGGGCATAAATTTATTGGTCAGCAGATGAAACGTGCCGGCGGGGTGATCGCGTTTGAACTGGCGGCAAAT
TTAGAAGAGGCTATGGCCTTTGTGGGGCATTTAAGCTTGTTCTCTATTGCGGTGAGCCTAGGCGATGCAGAATCCCTCAT
TCAACATCCAGCGTCGATGACGCACTCTCCCTATACGCCAGAGGCGAGAGCGGCGGCTGGCATTGGTGATAATCTGCTGC
GAATTTCCATTGGCTTAGAAGATTGTGACGACATTATCGCTGACTTGAGTCAAGCACTCGCGCGTTTGGCATAA

Protein sequence :
MQDESGKMWKAATQVIHGGHEREAFGALVTPLYQSATFVFESAQQGGERFAGNEPGYIYTRLGNPTTAELERKMAILEGA
EAAAATASGMGAVSAALLANLQMGDHLVASNAVYGCTYALMTTQFARFGIEVSLVDFSSVAEIEAAIKSNTKVIFCETPV
NPHLQVFDLAAIATIAKRHQLVSIVDNTFMTPLLQRPLDFGIDLVIHSATKYLNGHGDVIAGIVCGSEEQLHKVKYEILK
DIGAVISPHDAWLILRGLKTLDVRLQRHCDSAQRVAEFLAEHPSINRVYYPGLASHPGHKFIGQQMKRAGGVIAFELAAN
LEEAMAFVGHLSLFSIAVSLGDAESLIQHPASMTHSPYTPEARAAAGIGDNLLRISIGLEDCDDIIADLSQALARLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-64 43
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-63 42
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 6e-59 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal678_1685 YP_005272909.1 methionine gamma-lyase BAC0207 Protein 2e-82 52