Gene Information

Name : lysS (Awo_c09390)
Accession : YP_005268619.1
Strain : Acetobacterium woodii DSM 1030
Genome accession: NC_016894
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase LysS
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 1096641 - 1098107 bp
Length : 1467 bp
Strand : +
Note : -

DNA sequence :
TTGACGACTGAAAATATAAATGAGCTTCTTGAGATAAGAAGAGATAAACTGAAAAATTTGCAAGAAGCAGGGAAAAATCC
TTTCGAGCAAACGAGTTATAAGGTTAATGCCTTAGCTAAAAAAATTGAAGAAGCTTATGATGATTACGAAGAAAAAGAAG
TAAGCATAGCAGGACGGATCATGTCCAAAAGAGGTCAAGGGAAAGTATCGTTTTATGATCTCCAAGATTCTTCCGGCCGC
ATTCAATTATTTTTAAAAAAAGATAACCTGCCCGATATGTATGATGAAATCAAGACCTATGATATCGGTGATATTATTGG
GGTTAAAGGTGCAGTTTTTAAAACAAAAATGGGCCAGATATCGGTTAGAGTTTCGGACTTGACATTGTTAAGCAAATCAT
TGCAGATTCTACCGGAAAAATATCATGGACTTAAAGATATGGAACTGCGTTATCGTCAGCGTTATGTTGATCTCATTGTT
AATCCGGAAGTAAAAGATGTTTTCAAAAAACGTTCGTTGATCATGCGAAAAATACGCGAATTTTATGATGCCCGTGATTT
TATCGAAGTTGAAACGCCAGTGCTTTCCAATTTAGCGGGGGGAGCGAACGCCCGTCCTTTTATTACACATCATAATGCCT
TAGACATCCCATTATATTGTAGAATCGCCTTGGAACTGCCGCTTAAACGGTTGATCGTGGGTGGTTTTGACAAAGTTTAT
GAAATGAGTCGGGTCTTCCGAAACGAAGGGATGGATGCAACGCATAACCCGGAATTTACATTGTTGGAATCATATGAAGC
ATATGCCAACTATGATGATCTGATGAGAATGATCGAAGAGCTTTATAGCTTCCTGGCAAAAGAAGTTAATCAATCCGAAA
CCGTTATTTATGGCGATAAAGAAATCAGTCTGGCAGCACCATTTAAAAAAGCGCGTATGGTGGATCTTGTTAAAGAACAC
ACTAACGTGGATTTTGATGTGATGACCGATGTGGAAGTTGCCCGGGCAGCAGCGAAGGAACTACATGTTGATGTGGATGG
TAAAAACAGTGTTGGCGAAATTATGGCGGAAGTCTTTGACGAATTTGTTGAAGAGAAGCTTATTCAACCAACGTTTGTCA
CTATGCACCCGGTTGAAATTTCGCCATTAGCTAAAAAAGATCCTCAAGATCCACGCTATACAGAACGTTTTGAATTGTAC
ATAAATGGAGCAGAATGTGCCAACGCTTTCTCGGAACTGAATGACCCTATTGATCAAAAAGATCGATTTATGTCTCAGGT
GCAGAAAAAAACCGACGGTGATGATGAAGCCCATCCATTTGATGCTGACTTTATTAATGCCCTGGAAGTTGGTTTACCAC
CAACTGGCGGTTTGGGAATTGGAATTGATCGATTGGTGATGTTATTTACCAACCAGCATAGTATTCGCGATGTTATTTTA
TTCCCAACAATGAAACCAATTGATTAA

Protein sequence :
MTTENINELLEIRRDKLKNLQEAGKNPFEQTSYKVNALAKKIEEAYDDYEEKEVSIAGRIMSKRGQGKVSFYDLQDSSGR
IQLFLKKDNLPDMYDEIKTYDIGDIIGVKGAVFKTKMGQISVRVSDLTLLSKSLQILPEKYHGLKDMELRYRQRYVDLIV
NPEVKDVFKKRSLIMRKIREFYDARDFIEVETPVLSNLAGGANARPFITHHNALDIPLYCRIALELPLKRLIVGGFDKVY
EMSRVFRNEGMDATHNPEFTLLESYEAYANYDDLMRMIEELYSFLAKEVNQSETVIYGDKEISLAAPFKKARMVDLVKEH
TNVDFDVMTDVEVARAAAKELHVDVDGKNSVGEIMAEVFDEFVEEKLIQPTFVTMHPVEISPLAKKDPQDPRYTERFELY
INGAECANAFSELNDPIDQKDRFMSQVQKKTDGDDEAHPFDADFINALEVGLPPTGGLGIGIDRLVMLFTNQHSIRDVIL
FPTMKPID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 3e-102 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_005268619.1 lysyl-tRNA synthetase LysS VFG1668 Protein 2e-102 47