Gene Information

Name : kdpB (Awo_c05620)
Accession : YP_005268250.1
Strain : Acetobacterium woodii DSM 1030
Genome accession: NC_016894
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase B chain
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.12
Position : 646406 - 648478 bp
Length : 2073 bp
Strand : +
Note : -

DNA sequence :
ATGGAGTTGATTGATGTGGAAAATAATGAGTCGAAGAAAAACATCTTAATCGCAGCAATCAGGCAATCCTTTATCAAATT
ATCACCGCGGCGACAGCTAAAAAATCCGGTGATATTTGTGGTTTTTAGTGGGGCAATCATGACGACCACGCTTTATGGTC
TGAGCTTTGTTCAGATCAAAAGCGAAGGTGCCAACGATATCCTGATCATCACCTTAATACTCTGGCTTACGGTTTTATTT
GCGAATTTTGTCGAAGCTATTGCCGAAGGCCGGGGTCGCGCTCAAACCGATAGTTTGCGGCGAACCCGAAAAGATGTAAA
AGTGCGAAAGCTGAATGACTGGTCTGATTTGGCACTTTATACAGAGGTTAAGCTAAATCGTTTGAAAAAGGGTGATCTTG
TTTATGTGAAATCTGGCGAACTAATCCCCTTAGATGGGAATGTTATCGAAGGGACGGCTTTAGTGGATGAAAGTGCGATC
ACAGGAGAAGCGGCTCCGGTGCTCCGAGAATCACGAGAGGGTTATCGTGCGGTTAGTGGGGGAAGCAAGCTTTTATCGGA
TTGGCTGGTCATTCAGGTGACGGTTGAAAATAGTGAGCGTTTTTGGGATAAAATGATTATGCTGGCTAGAGAGTCAGCGC
GAAAGAAAACGCCCAATGCGTTCGCCGTGCAGATTTTTCTGATGACTCTGACAATTATCTTTCTGGTAGTTGGGGTTATC
TTGCTGCCGTCTTCTTATTTTTTTGGTGAACAAGCAGGTACTGGTGCGGCGATATCGCTCACTTATGTCATCGCTTTGCT
GGTTTGTCTGGCTCCGACAACGATGGGGGCGCTGCTTTCACCGATGGGAATTGCCGGTATGAATCGGCTGCAACAGGTTA
ATGTGCTGGCTAAAAGCGGCAGCGCCATTGAGGCGGCTGGGAATGTGGATGTATTATTGTTGGATAAAACCGGGATAATT
ACGCGGGGAAATCGACAGGCCAGTGTTTTTATCCCAATAACCGGGGTCACTGAAAAAGAGCTGGCGGTAGCGTCGCAATT
AGCTTCTCTGGCCGACGAAACGGCGGAAGGGCGAAGTATTGTGGTTTTGGCCAAGGAACGGTTTGATCTGCGGGAGCGGG
ACATGAAAGCATTGGGAGCGAGTTGCGTGGCATTAACGGAAAAAGCCCCAATAAGTGGTATCAATTATCGCGGAAATGAG
CTTCGTAAAGGGGCTGCCGAAGCGATCAAAGCCTTCGTTTTGGGCAACGGTGGCAATTATCCGCAAGAATGCCATGAGAT
TGCCCAAAAGGTGGCAAATGATGGGGGAATCCCACTGGTTGTGGCAAAAAACAAGCGGGTGCTGGGGGTAATTTACCTGA
AAGATGTTGGCGAAAATGAGATCAAGGAACGTTTTGAAGATTTACGCCAAATGGGCGTCAAAACGATCATGATTACCAGT
GACAATCCGATGACGGCAGCCGCTATTGCGGCTGAAGCTGGAGTCGATGATTTTCTGGCTGGAGCTACTCCGGATACTAA
GCTGGCACTGATCCGAAATTATCAGGCGCAGGGACAGCAGGTAGCAGTGTCCGGGAATGAAACCAAGGATATATCAGCCC
TGATCCAGGCCGATGTAGCAGTGGCGATGAATACCAGTGCTACGGCGGTTAAAGAAGCTGGAAACATGATAGATCTGGAT
TCCAATCCCACCAAACTCATCGAGATTGTCCGGATTGGAAAACAATTACTGATGACCAGAGGGGCATTGACAACCTTTAG
CGTGGCGAATGATCTGGCAGAATATTTTGCGCTTATTCCGGTTTTGTTTTACAATATTTATCAACCATTAGCAAGGCTGA
ATATATTGGGGTTAACCAGTGTAAAAAATGCCATCTTGGTAGTGCTTAGTTATAATGTGTTGCTTATTATTGCGATGATT
CCTTTGGTTTTAAAGGGCGGTAAGGATCAAGGAAGGGTGACGGCAAAATGGTTTGAAAAAAACAGGCTGATTGATGGCTT
AGGGGGTTTATTAACTCCATTTGTAGCGATTAAATTACTGAATATGTTGTTAACGGCGCTGGGTCTTGAGTGA

Protein sequence :
MELIDVENNESKKNILIAAIRQSFIKLSPRRQLKNPVIFVVFSGAIMTTTLYGLSFVQIKSEGANDILIITLILWLTVLF
ANFVEAIAEGRGRAQTDSLRRTRKDVKVRKLNDWSDLALYTEVKLNRLKKGDLVYVKSGELIPLDGNVIEGTALVDESAI
TGEAAPVLRESREGYRAVSGGSKLLSDWLVIQVTVENSERFWDKMIMLARESARKKTPNAFAVQIFLMTLTIIFLVVGVI
LLPSSYFFGEQAGTGAAISLTYVIALLVCLAPTTMGALLSPMGIAGMNRLQQVNVLAKSGSAIEAAGNVDVLLLDKTGII
TRGNRQASVFIPITGVTEKELAVASQLASLADETAEGRSIVVLAKERFDLRERDMKALGASCVALTEKAPISGINYRGNE
LRKGAAEAIKAFVLGNGGNYPQECHEIAQKVANDGGIPLVVAKNKRVLGVIYLKDVGENEIKERFEDLRQMGVKTIMITS
DNPMTAAAIAAEAGVDDFLAGATPDTKLALIRNYQAQGQQVAVSGNETKDISALIQADVAVAMNTSATAVKEAGNMIDLD
SNPTKLIEIVRIGKQLLMTRGALTTFSVANDLAEYFALIPVLFYNIYQPLARLNILGLTSVKNAILVVLSYNVLLIIAMI
PLVLKGGKDQGRVTAKWFEKNRLIDGLGGLLTPFVAIKLLNMLLTALGLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 1e-174 59
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-174 59
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 3e-120 47
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-119 46
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-119 46
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-119 46
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-119 46
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 2e-119 46