Gene Information

Name : phoB (Awo_c24230)
Accession : YP_005270069.1
Strain : Acetobacterium woodii DSM 1030
Genome accession: NC_016894
Putative virulence/resistance : Virulence
Product : transcriptional regulator PhoB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2828566 - 2829261 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAAATATTAGTTATCGAAGATGAGTTAAATATATATGAGTTGATTAAATTCAATCTTGAAACCCATGGATTTGA
AGTGGCAGGAGTACAAGATGGTGGCATCGCAATTGATAAGATCTTAAATATTTTACCGGATTTGATAATTCTGGATTTAA
TGCTGCCAGGGAAAGATGGAATCAGTATTTGTCGCGAAATTCGGGCAAATTCAATCATTTCTTATATTCCCATTATTATG
CTGACGGCCAAGAGTGAGGAATTTGATAAGGTATTAGGGCTGGAGATCGGTGCGGATGACTATATTACCAAGCCGTTTGG
AGTAAAAGAACTTTGCGCCAGAGTGAAGGCGGTTTTAAGACGGACTGAAATTTTATTGTCAAAAGAAGATGAAGCCATTT
TTATTGGTGATTTACATATTGAACCCAAAGCTTTTGAAGTGTATCAAAACGAAAAAAAATTGACGTTGACGTTAAAAGAA
TATGAATTACTGGTATTTTTAGCCAAACATCGCGGCCAAGTATTAACGCGAGATCAGTTATTAGATCAGATCTGGGGGTT
TGACTATTATGGCGAGACGAGAACCGTCGATGTTCATATCAGATATTTACGAAAAAAAATAGAGGAGCAATCCGGAGATG
GGCGAAAATATATTGAAACCGTACGCGGTGTTGGTTATCGCTTTATCGAAAAATAA

Protein sequence : 
MKKILVIEDELNIYELIKFNLETHGFEVAGVQDGGIAIDKILNILPDLIILDLMLPGKDGISICREIRANSIISYIPIIM
LTAKSEEFDKVLGLEIGADDYITKPFGVKELCARVKAVLRRTEILLSKEDEAIFIGDLHIEPKAFEVYQNEKKLTLTLKE
YELLVFLAKHRGQVLTRDQLLDQIWGFDYYGETRTVDVHIRYLRKKIEEQSGDGRKYIETVRGVGYRFIEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-30 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-30 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_005270069.1 transcriptional regulator PhoB HE999704.1.gene2815. Protein 2e-42 52
phoB YP_005270069.1 transcriptional regulator PhoB NC_002952.2859905.p0 Protein 4e-42 50
phoB YP_005270069.1 transcriptional regulator PhoB NC_007622.3794472.p0 Protein 5e-42 50
phoB YP_005270069.1 transcriptional regulator PhoB NC_007793.3914279.p0 Protein 4e-42 49
phoB YP_005270069.1 transcriptional regulator PhoB NC_002745.1124361.p0 Protein 4e-42 49
phoB YP_005270069.1 transcriptional regulator PhoB NC_009782.5559369.p0 Protein 4e-42 49
phoB YP_005270069.1 transcriptional regulator PhoB NC_002951.3237708.p0 Protein 4e-42 49
phoB YP_005270069.1 transcriptional regulator PhoB NC_003923.1003749.p0 Protein 4e-42 49
phoB YP_005270069.1 transcriptional regulator PhoB NC_002758.1121668.p0 Protein 4e-42 49
phoB YP_005270069.1 transcriptional regulator PhoB NC_009641.5332272.p0 Protein 4e-42 49
phoB YP_005270069.1 transcriptional regulator PhoB NC_013450.8614421.p0 Protein 4e-42 49
phoB YP_005270069.1 transcriptional regulator PhoB NC_012469.1.7685629. Protein 9e-37 48
phoB YP_005270069.1 transcriptional regulator PhoB AE015929.1.gene1106. Protein 1e-25 47
phoB YP_005270069.1 transcriptional regulator PhoB NC_012469.1.7686381. Protein 4e-35 46
phoB YP_005270069.1 transcriptional regulator PhoB AE000516.2.gene3505. Protein 2e-27 46
phoB YP_005270069.1 transcriptional regulator PhoB NC_003923.1003417.p0 Protein 2e-27 45
phoB YP_005270069.1 transcriptional regulator PhoB NC_013450.8614146.p0 Protein 2e-27 45
phoB YP_005270069.1 transcriptional regulator PhoB NC_002951.3238224.p0 Protein 2e-27 45
phoB YP_005270069.1 transcriptional regulator PhoB NC_007793.3914065.p0 Protein 2e-27 45
phoB YP_005270069.1 transcriptional regulator PhoB NC_002758.1121390.p0 Protein 2e-27 45
phoB YP_005270069.1 transcriptional regulator PhoB NC_010079.5776364.p0 Protein 2e-27 45
phoB YP_005270069.1 transcriptional regulator PhoB NC_002952.2859858.p0 Protein 2e-27 45
phoB YP_005270069.1 transcriptional regulator PhoB NC_007622.3794948.p0 Protein 2e-27 45
phoB YP_005270069.1 transcriptional regulator PhoB AE016830.1.gene1681. Protein 3e-36 45
phoB YP_005270069.1 transcriptional regulator PhoB NC_010410.6002989.p0 Protein 7e-29 44
phoB YP_005270069.1 transcriptional regulator PhoB NC_010400.5986590.p0 Protein 6e-28 44
phoB YP_005270069.1 transcriptional regulator PhoB NC_011595.7057856.p0 Protein 7e-29 44
phoB YP_005270069.1 transcriptional regulator PhoB AF155139.2.orf0.gene Protein 9e-26 44
phoB YP_005270069.1 transcriptional regulator PhoB FJ349556.1.orf0.gene Protein 1e-26 44
phoB YP_005270069.1 transcriptional regulator PhoB NC_014475.1.orf0.gen Protein 2e-26 43
phoB YP_005270069.1 transcriptional regulator PhoB NC_005054.2598277.p0 Protein 2e-26 43
phoB YP_005270069.1 transcriptional regulator PhoB NC_002695.1.916589.p Protein 4e-22 42
phoB YP_005270069.1 transcriptional regulator PhoB BAC0596 Protein 6e-22 42
phoB YP_005270069.1 transcriptional regulator PhoB BAC0039 Protein 5e-22 42
phoB YP_005270069.1 transcriptional regulator PhoB CP001138.1.gene2239. Protein 6e-22 42
phoB YP_005270069.1 transcriptional regulator PhoB CP000034.1.gene2186. Protein 5e-22 42
phoB YP_005270069.1 transcriptional regulator PhoB HE999704.1.gene1528. Protein 1e-20 41
phoB YP_005270069.1 transcriptional regulator PhoB CP004022.1.gene1676. Protein 7e-23 41
phoB YP_005270069.1 transcriptional regulator PhoB CP000034.1.gene3671. Protein 2e-30 41
phoB YP_005270069.1 transcriptional regulator PhoB CP000647.1.gene2531. Protein 2e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_005270069.1 transcriptional regulator PhoB VFG1563 Protein 1e-30 43
phoB YP_005270069.1 transcriptional regulator PhoB VFG1702 Protein 1e-30 43
phoB YP_005270069.1 transcriptional regulator PhoB VFG1389 Protein 9e-26 43