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Name : capD (Awo_c20870) Accession : YP_005269752.1 Strain : Acetobacterium woodii DSM 1030 Genome accession: NC_016894 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein CapD Function : - COG functional category : - COG ID : - EC number : - Position : 2464446 - 2466311 bp Length : 1866 bp Strand : - Note : - DNA sequence : GTGAAAAAGAAAACAAGCAGGCAGCTATTTCTAGTTGTTACTGATATCTTATTAGTAAATATTGCTTTTCTATTAGCATT GTTGTTACATTATGAGGGTCATATCCCAATCGCGATTAGAACTATTTACCTAAATAGTTTTATCATTTTGACGATTGGTA AAATTTTAATTTATCGGTATTTTGAGTTATATAGTAGTTTATGGTCATATGCTTCAGTGGATGAATTTATGAAAATTCTA ATAGCGGGTTTTGTGACAAATGTTTTTAGTACTGTATATCTCATATTAATGGGAGCTCAACTATTCTTTGGCGTTTATAT AACAGCAATGATTCTGGAAGTTGGATTTATTGGCGGGGTGCGTTTTAGCTATCGACTGCTTAGAAATCTAAAAAATAAAA ATTTATTTAACAAACAGGAACATGAGAAAAAAATATTGATCATTGGAAGTGGATCAACAGCAACTCTGATTGCTACTGAA ATCAGAAATCACGCATCAAACTATGGCCAAGTGATTGGTTTTATTGATGATGATGAGAATAAATTGAATAAAAGCATTTC GGGAGTGAAAGTTTTAGGAAACTATCATGACATTTATGGTATTGTCTATAAATATCACATCAATGAAATTATTATTGCAG TTCCGACAGCTGGTCCTTATACGGTAAGGATGGTTATCGCAGAGTGTAAACGAACAGATGCCAAGGTTCGGATTATGCCA GGGATTCGTGAAGTAATAGATGGACAAGTATCGCTTAATAAAATAAGAGGCGTTGAGATAGAAGATCTTTTAGGCAGAGA TTCAGTTAATTTACATGTCACAGAAGTAATTAGTTACATTGAGAATAAGACTATTTTAGTAACTGGCGGCGGTGGTTCTA TTGGCTCGGAATTATGCCGACAGCTTGCTAAATTTAATCCTAAAAAACTGGTTATTCTTGACAATTATGAAAATAATGCC TACGAAATTCAGAATGAACTAATAAAAGAATATGGAACAAAGCTAAATCTTGAAATTATTATTGCTTCGGTAAGAGATCG CTATAATATTTTTACAATTATAGGAAGCTTGCGACCTGATGTGATATTCCATGCGGCGGCGCATAAACATGTGCCACTAA TGGAACATTCACCTCGTGAAGCGATAAAAAACAATGCGTTTGGAACTCGAAATGTGGCTGAAGCGGCTCATGAATATGAT GTTGAACGCTTTGTCTTAATCTCGACGGATAAGGCTGTTAATCCGACAAATATCATGGGAGCCAGTAAGCGGATATGTGA AATGATCATTCAGGGTCTTGCCAAAAAAAGCAAAACCAAATTTACGGCAGTCAGATTTGGAAATGTTCTTGATAGTAATG GTTCTGTTGTTCCCCTTTTCAAGAAACAAATCAAGGAAGGTGGGCCGGTTACGGTCACACATAAAGATATTATTCGTTAC TTTATGACAATTCCAGAAGCTGCCCAACTGGTGATACAATCCGGGGCAATTGCCAAGGGCGGAGAAATATTTATTCTTGA TATGGGAGAGCCAGTAAAAATATATGATTTGGCGGTAGATTTAATTAAACTCTCAGGGCTTAAACTCGATGAAGATATAA AAATTGAAATAACAGGCCTGAGACCAGGAGAGAAACTTTATGAAGAACTGCTTATGGATGAAGAGGGATTAACCGATACT AAATTTGAAAAAATCCATATTGGAAAACCGATTGATATCGATTATACAGAGTTAAAAAAATCACTGGATGAATTATCACA GATCGTGAAATTAGAGGACACAAATCAACTCATTAATACAGTAAAAAGAATTGTTCCTACGTACAGAAATAATACTGAAG TAAATAAAGAAAAAGAATTGAATTGA Protein sequence : MKKKTSRQLFLVVTDILLVNIAFLLALLLHYEGHIPIAIRTIYLNSFIILTIGKILIYRYFELYSSLWSYASVDEFMKIL IAGFVTNVFSTVYLILMGAQLFFGVYITAMILEVGFIGGVRFSYRLLRNLKNKNLFNKQEHEKKILIIGSGSTATLIATE IRNHASNYGQVIGFIDDDENKLNKSISGVKVLGNYHDIYGIVYKYHINEIIIAVPTAGPYTVRMVIAECKRTDAKVRIMP GIREVIDGQVSLNKIRGVEIEDLLGRDSVNLHVTEVISYIENKTILVTGGGGSIGSELCRQLAKFNPKKLVILDNYENNA YEIQNELIKEYGTKLNLEIIIASVRDRYNIFTIIGSLRPDVIFHAAAHKHVPLMEHSPREAIKNNAFGTRNVAEAAHEYD VERFVLISTDKAVNPTNIMGASKRICEMIIQGLAKKSKTKFTAVRFGNVLDSNGSVVPLFKKQIKEGGPVTVTHKDIIRY FMTIPEAAQLVIQSGAIAKGGEIFILDMGEPVKIYDLAVDLIKLSGLKLDEDIKIEITGLRPGEKLYEELLMDEEGLTDT KFEKIHIGKPIDIDYTELKKSLDELSQIVKLEDTNQLINTVKRIVPTYRNNTEVNKEKELN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-98 | 48 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-99 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| capD | YP_005269752.1 | capsular polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 2e-98 | 47 |
| capD | YP_005269752.1 | capsular polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 6e-85 | 42 |
