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Name : pilB (Awo_c01980) Accession : YP_005267896.1 Strain : Acetobacterium woodii DSM 1030 Genome accession: NC_016894 Putative virulence/resistance : Virulence Product : type IV pilus assembly protein PilB Function : - COG functional category : - COG ID : - EC number : - Position : 231233 - 232912 bp Length : 1680 bp Strand : + Note : - DNA sequence : ATGGATACTAAAAACATTCGAATTGGCGAGATCCTTAAAAATGCCGGGTATATAACTGAAGAACATTTACAAGAGGCGTT GGTTTATCAAAAGATAGACAAAACTAAACGACTGGGCAGTATTCTGGTTGATTATGGTTATTTAACTGAAGAACAACTGC TTGACGCTTTGTCAAAGCGGTTAGATGTGGAAGTTGTTAATCTTCCGGATATTGGCATTGATCTTGAAGCCGCTGCGAAA ATACCTCAAAGTACCGCTGTAAAATATAATCTTATTCCCATTAGTCATGAAAATAACCGTTTGTTGGTAGTAATGAATGA TCCGATGGATTTTTATGCTATTGAAGACATCAGGCTGCTAACCAACATGCCGATTGACGTGGTATTGGGGGGAAAAGTGG CGATTCAAACGGCCATTCAAAAGGTTTATACTGAAATTGAAGCCAGAAAAGCGGCGTCAACGGCCAACAAAGCGGTGGTT GGTGGCAGTATTTCTTCGGTTGAAAATATTGTCACTAACGAAGGTGATGCACCGGTTGTCAGTCTGGTTAATTCGATTCT GTTAAAAGGTCATAATGCCGGAGCCAGTGATATCCACATTGAACCCTTTGAAGATAAAACCCTGATCCGGATGCGAATTG ACGGATTAATTGTCGATTATATGTCATTGTCGAATACGCTGCATCAATCAATGATCGCCCGGGTCAAAATTTTATCGAAT TTAGATATCGCTGAACGTCGCGTCCCTCAGGATGGTCACTTTCGGGTCAAAATTGATGGTGTGGAATTAAATGTGCGAAC CTCCAGTATTCCAACGGTTTATGGCGAAAAAATAGTGTTGCGTTATTTGAGTATGAATACATCGCTCGATCATGCCGGAC AATTTGGAATGAATGATCAGGATTATAAAAAAATTATTAAAATCCTCCAAAGTCCTCATGGGGTGGTTTATATTACCGGC CCTACCGGAAGTGGAAAAACAACGACTTTATATATGATTCTGGAAATGTTGAGTAAACGATCGGTAAATATTGCCACCAT TGAAGATCCGGTGGAAAGAAAATTGGCGGGGGTTAATCAAACGCAGGTGAATGTTCTGGCTGGTCTGACCTTTGATTCCG GACTACGATCAATTCTGCGACAGGACCCGGATATTATCATGGTTGGTGAAACAAGAGACAACGAAACCGCATCGATCGTG GTTCGGGCGGCGATCACCGGGCATCTGGTACTTTCGACTTTGCATACCAACGATGCCGTATCAGCGATTGTCCGACTGGA AGATATGGGCGTTGAATCATATATGGTAGGCAGTTCCTTAACCGGAGTTGTGGCTCAACGGCTGGTGAAAAAGATATGCG AAAATTGTAAAGAGCAATATTTAACCAATGACATCGAACGGTTCCATTTAGGCGAAGATGTCAAAACCCTTTACCGCGGC AGAGGTTGCAATGTCTGTAACAATACCGGCTATAAAGGGCGAATTGCCATTCATGAAATTCTGGCAGTTGATAAAACGAT CAGAACAATGGTTTCAAGAAAAAATGCCATCGAAGATATCTATGCTTATGTTGAAAAAAATCAAAAGGTGATTCCGCTTC GGGACAGTGTTGCAAATTTGACCAGAGCTGGCGTGACCACCATGGAAGAATATCTAAAACTATCCTATTACGTAGAATAA Protein sequence : MDTKNIRIGEILKNAGYITEEHLQEALVYQKIDKTKRLGSILVDYGYLTEEQLLDALSKRLDVEVVNLPDIGIDLEAAAK IPQSTAVKYNLIPISHENNRLLVVMNDPMDFYAIEDIRLLTNMPIDVVLGGKVAIQTAIQKVYTEIEARKAASTANKAVV GGSISSVENIVTNEGDAPVVSLVNSILLKGHNAGASDIHIEPFEDKTLIRMRIDGLIVDYMSLSNTLHQSMIARVKILSN LDIAERRVPQDGHFRVKIDGVELNVRTSSIPTVYGEKIVLRYLSMNTSLDHAGQFGMNDQDYKKIIKILQSPHGVVYITG PTGSGKTTTLYMILEMLSKRSVNIATIEDPVERKLAGVNQTQVNVLAGLTFDSGLRSILRQDPDIIMVGETRDNETASIV VRAAITGHLVLSTLHTNDAVSAIVRLEDMGVESYMVGSSLTGVVAQRLVKKICENCKEQYLTNDIERFHLGEDVKTLYRG RGCNVCNNTGYKGRIAIHEILAVDKTIRTMVSRKNAIEDIYAYVEKNQKVIPLRDSVANLTRAGVTTMEEYLKLSYYVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-84 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-84 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_005267896.1 | type IV pilus assembly protein PilB | VFG2048 | Protein | 4e-86 | 45 |
| pilB | YP_005267896.1 | type IV pilus assembly protein PilB | VFG0182 | Protein | 1e-83 | 43 |
