Gene Information

Name : phoP (Awo_c12830)
Accession : YP_005268956.1
Strain : Acetobacterium woodii DSM 1030
Genome accession: NC_016894
Putative virulence/resistance : Virulence
Product : transcriptional regulator PhoP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1495736 - 1496422 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence :
ATGAATGAAAAAATACTCGTTGTCGATGACGAAGCATCGATTGTTGATTTAATAAAATTAGAACTGGAATTTGAAGGTTA
TCAAGTAGAAACTGCCAGCGATGGCATGGAAGCTGTTGAAAAAGCGTTGGAGATTCATCCCGATCTGATTGTTCTGGATC
TGATGCTTCCTAAAAAAAGCGGCTATGATGTCTGTCGTGAACTCTCGCCCCAATTGGGTGTACCGATCATTCTTCTAACC
GCCAAAACCGATATTATTGACAAAGTTTTAGGCTTAGAATTGGGGGCTGATGATTACCTCACCAAACCATTTGATAACCG
CGAGCTACTAGCCCGGATTAAGGCCCATCTAAGACGCTCAAATACAATCATTGAACCACAAAAACAGGAATCACTTTTAA
AAAATGGCGATTTATGTATTTATGCCGACGAACGGATGGTAACGCTGGAAGGAAAAGAAATTCATTTAACACCAAAAGAG
TTTGAATTACTTTTCTTATTGGCATCCAATCTCGAGCAGGTCTTTCCGCGGGACACCCTACTCGAAAAAATTTGGGGTTA
TGATTATTATGGCGACACCCGAACGGTTGACATGCATGTTCAACGAATCCGTCGCAAAATAGATACTCAGGGAAATAAGT
ACATCCAAACAGTCTTTGGAATTGGATATAAAATGAGGAAACTTTAA

Protein sequence :
MNEKILVVDDEASIVDLIKLELEFEGYQVETASDGMEAVEKALEIHPDLIVLDLMLPKKSGYDVCRELSPQLGVPIILLT
AKTDIIDKVLGLELGADDYLTKPFDNRELLARIKAHLRRSNTIIEPQKQESLLKNGDLCIYADERMVTLEGKEIHLTPKE
FELLFLLASNLEQVFPRDTLLEKIWGYDYYGDTRTVDMHVQRIRRKIDTQGNKYIQTVFGIGYKMRKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-38 43
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-38 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoP YP_005268956.1 transcriptional regulator PhoP HE999704.1.gene2815. Protein 7e-48 53
phoP YP_005268956.1 transcriptional regulator PhoP NC_012469.1.7685629. Protein 3e-46 50
phoP YP_005268956.1 transcriptional regulator PhoP AF155139.2.orf0.gene Protein 2e-47 49
phoP YP_005268956.1 transcriptional regulator PhoP NC_002952.2859905.p0 Protein 4e-45 48
phoP YP_005268956.1 transcriptional regulator PhoP NC_013450.8614421.p0 Protein 6e-45 48
phoP YP_005268956.1 transcriptional regulator PhoP NC_007793.3914279.p0 Protein 6e-45 48
phoP YP_005268956.1 transcriptional regulator PhoP NC_002745.1124361.p0 Protein 6e-45 48
phoP YP_005268956.1 transcriptional regulator PhoP NC_009782.5559369.p0 Protein 6e-45 48
phoP YP_005268956.1 transcriptional regulator PhoP NC_002951.3237708.p0 Protein 6e-45 48
phoP YP_005268956.1 transcriptional regulator PhoP NC_003923.1003749.p0 Protein 4e-45 48
phoP YP_005268956.1 transcriptional regulator PhoP NC_002758.1121668.p0 Protein 6e-45 48
phoP YP_005268956.1 transcriptional regulator PhoP NC_007622.3794472.p0 Protein 4e-45 48
phoP YP_005268956.1 transcriptional regulator PhoP NC_009641.5332272.p0 Protein 6e-45 48
phoP YP_005268956.1 transcriptional regulator PhoP AE000516.2.gene3505. Protein 4e-42 48
phoP YP_005268956.1 transcriptional regulator PhoP FJ349556.1.orf0.gene Protein 2e-44 45
phoP YP_005268956.1 transcriptional regulator PhoP NC_002758.1121390.p0 Protein 7e-40 44
phoP YP_005268956.1 transcriptional regulator PhoP NC_010079.5776364.p0 Protein 7e-40 44
phoP YP_005268956.1 transcriptional regulator PhoP NC_002952.2859858.p0 Protein 7e-40 44
phoP YP_005268956.1 transcriptional regulator PhoP NC_007622.3794948.p0 Protein 7e-40 44
phoP YP_005268956.1 transcriptional regulator PhoP NC_003923.1003417.p0 Protein 7e-40 44
phoP YP_005268956.1 transcriptional regulator PhoP NC_013450.8614146.p0 Protein 7e-40 44
phoP YP_005268956.1 transcriptional regulator PhoP NC_002951.3238224.p0 Protein 7e-40 44
phoP YP_005268956.1 transcriptional regulator PhoP NC_007793.3914065.p0 Protein 7e-40 44
phoP YP_005268956.1 transcriptional regulator PhoP AE016830.1.gene1681. Protein 9e-42 44
phoP YP_005268956.1 transcriptional regulator PhoP HE999704.1.gene1528. Protein 8e-35 43
phoP YP_005268956.1 transcriptional regulator PhoP AE015929.1.gene1106. Protein 2e-35 42
phoP YP_005268956.1 transcriptional regulator PhoP NC_012469.1.7686381. Protein 3e-40 42
phoP YP_005268956.1 transcriptional regulator PhoP BAC0347 Protein 8e-32 42
phoP YP_005268956.1 transcriptional regulator PhoP BAC0111 Protein 1e-31 42
phoP YP_005268956.1 transcriptional regulator PhoP BAC0533 Protein 7e-32 42
phoP YP_005268956.1 transcriptional regulator PhoP CP000647.1.gene4257. Protein 7e-32 42
phoP YP_005268956.1 transcriptional regulator PhoP CP004022.1.gene3215. Protein 1e-35 42
phoP YP_005268956.1 transcriptional regulator PhoP AM180355.1.gene1830. Protein 3e-36 41
phoP YP_005268956.1 transcriptional regulator PhoP NC_002695.1.915041.p Protein 9e-32 41
phoP YP_005268956.1 transcriptional regulator PhoP CP001138.1.gene4273. Protein 1e-31 41
phoP YP_005268956.1 transcriptional regulator PhoP CP000034.1.gene3834. Protein 9e-32 41
phoP YP_005268956.1 transcriptional regulator PhoP CP001918.1.gene5135. Protein 6e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoP YP_005268956.1 transcriptional regulator PhoP VFG1702 Protein 1e-38 43
phoP YP_005268956.1 transcriptional regulator PhoP VFG1563 Protein 8e-39 42