Gene Information

Name : fliI (WIGMOR_0061)
Accession : YP_005267144.1
Strain : Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony)
Genome accession: NC_016893
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 62101 - 63462 bp
Length : 1362 bp
Strand : -
Note : -

DNA sequence :

ATGACACTACAATTAAAAAAATGGATTGATAAAATTAGCAATCAAGAAAGTTTGATTTCTAATTTACCTGATTACTATCA
ATATGGCAAATTAGTTCGTGCAACCGGTATTATTATGGAAGTAACTGGTTTGCAGCTTCCTATCGGATCAACGTGCATTA
TTGAAAAGTATGTTGAAAAATCCGTCATCCAAGTAGAATGCGAAGTAGTAGGATTTAAAGAAAAAAACTTGTTTGTAATT
CCTTTAGAAAATGTAGATGGAATCTTTCCGGGAGCTAAAGTATATTCTCCAGAATTAATTAATGGAAAAATTTCTACAAG
ATTACTGCCATTAGGTACAGAACTATTAGGTAGAGTGTTAAATAGTTCTGGACAATTCTTAGATCGTATGCCAGTACCAA
AAGTATTAAGAAAAGAATCTTTGTATACTAATCCCATTAATCCTTTATTACGTGATCCAATTACAAAAATTTTAGATGTC
GGAGTTAGAGCTATTAATGGATTGATAACTGTAGGAAGAGGCCAAAGAATGGGATTATTTGCTGGATCTGGTGTAGGAAA
AAGCATGTTACTTGGCATGATGGCTAGATATACCGAAGCAGATATTATAGTAGTTGCATTAATTGGAGAAAGAGGCCGTG
AAGTTAAAGATTTTATTGAAAATATTTTACAAAAAGACGGAATTTCTAGATCTGTAGTAATTGCAGCTCCAGCTGATATT
GCGCCGATGTTAAGAATACAAGGTGCAGTATATGCTACTCGAATTGCAGAAGATTTTAGAGATCAAGGCAAACATGTTTT
ATTAATTATGGACTCTTTAACTCGCTATGCAATGGCACAAAGAGAAATAGGTTTAGCTATCGGAGAACCGCCTACAACTA
AAGGATACCCTCCTTCTGTTTTTTCAAAATTGTCCGAATTAGTAGAAAAAACTGGGAATGGTACACAAAATCACGGCTCT
ATTACAGCTTTTTATACTGTTTTAATAGAAGGCGATGATCAACAAGATCCTATTGCGGACGCTGCGCGAGCAATTTTAGA
TGGACATATCATACTATCTAGACAACTATCAGAGTCTGGACATTATCCATCTATAGAAATTGAAACTTCTATTAGTAGAG
CTATGCCAAATTTAGTAAAAAAATCACATTTTTTTCATATACAACAAATTAAACAATGGATATCGAGTTATCAAAAAAAT
AAAGATCTATTATCAGTAGGTGCATATGCTTCTGGTAATGATCCGATATTAGATGAAGCAATAAAAAATTATCCTAAATT
AATGCAATATTTAAAACAAAATATAGAAGATAAATGTTCTTATGAAGAATCTTATCAACAATTAAAAAAATTATTTTCTT
AA

Protein sequence :

MTLQLKKWIDKISNQESLISNLPDYYQYGKLVRATGIIMEVTGLQLPIGSTCIIEKYVEKSVIQVECEVVGFKEKNLFVI
PLENVDGIFPGAKVYSPELINGKISTRLLPLGTELLGRVLNSSGQFLDRMPVPKVLRKESLYTNPINPLLRDPITKILDV
GVRAINGLITVGRGQRMGLFAGSGVGKSMLLGMMARYTEADIIVVALIGERGREVKDFIENILQKDGISRSVVIAAPADI
APMLRIQGAVYATRIAEDFRDQGKHVLLIMDSLTRYAMAQREIGLAIGEPPTTKGYPPSVFSKLSELVEKTGNGTQNHGS
ITAFYTVLIEGDDQQDPIADAARAILDGHIILSRQLSESGHYPSIEIETSISRAMPNLVKKSHFFHIQQIKQWISSYQKN
KDLLSVGAYASGNDPILDEAIKNYPKLMQYLKQNIEDKCSYEESYQQLKKLFS

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
YPO0267	YP_002345348.1	type III secretion system ATPase	Virulence	Not named	Protein	6e-74	47
escN	NP_290268.1	hypothetical protein	Virulence	LEE	Protein	2e-74	46
ECs4568	NP_312595.1	EscN	Virulence	LEE	Protein	2e-74	46
escN	AAC38383.1	EscN	Virulence	LEE	Protein	6e-75	46
escN	YP_003236088.1	translocator EscN	Virulence	LEE	Protein	1e-74	46
escN	AAC31513.1	L0034	Virulence	LEE	Protein	2e-74	46
unnamed	ACU09458.1	type III secretion apparatus H+-transporting two-sector ATPase	Virulence	LEE	Protein	2e-74	46
escN	AAK26715.1	EscN	Virulence	LEE	Protein	3e-75	46
escN	AAL57542.1	EscN	Virulence	LEE	Protein	3e-75	46
unnamed	AAL06369.1	EscN	Virulence	LEE	Protein	3e-74	46
escN	CAC81862.1	EscN protein	Virulence	LEE II	Protein	3e-75	46
escN	CAI43874.1	EscN protein	Virulence	LEE	Protein	1e-74	45
escN	YP_003223475.1	translocator EscN	Virulence	LEE	Protein	2e-74	45
escN	YP_003232153.1	T3SS structure protein EscN	Virulence	LEE	Protein	5e-75	45
escN	AFO66415.1	putative LEE-encoded type III secretion system ATPase	Virulence	SESS LEE	Protein	7e-76	44
escN	AFO66300.1	putative LEE-encoded type III secretion system ATPase	Virulence	SESS LEE	Protein	7e-76	44
hrcN	NP_640767.1	type III secretion system ATPase	Virulence	Hrp PAI	Protein	2e-75	42
hrcN	YP_198730.1	type III secretion system ATPase	Virulence	Hrp PAI	Protein	2e-76	42
hrcN	AAP34339.1	HrcN	Virulence	Hrp PAI	Protein	4e-76	42
hrpB6	AAB08461.1	HrpB6	Virulence	Hrp PAI	Protein	6e-75	42
hrpB6	BAB07852.1	HrpB6	Virulence	Hrp PAI	Protein	1e-76	42
hrpB6	AAF61281.1	HrpB6	Virulence	Hrp PAI	Protein	1e-76	42
XC_3006	YP_244074.1	type III secretion system ATPase	Virulence	Hrp PAI	Protein	1e-74	42
hrcN	NP_636610.1	type III secretion system ATPase	Virulence	Hrp PAI	Protein	1e-74	42
hrcN	YP_362163.1	type III secretion system ATPase	Virulence	Hrp PAI	Protein	9e-75	42
hrcN	ABA47275.1	HrcN	Virulence	S-PAI	Protein	3e-70	42
ssaN	CAA70537.1	secretion system apparatus	Virulence	SPI-2	Protein	9e-68	42
ssaN	NP_460380.1	type III secretion system ATPase	Virulence	SPI-2	Protein	1e-67	42
ssaN	NP_456113.1	putative type III secretion ATP synthase	Virulence	SPI-2	Protein	2e-68	42
ssaN	NP_805086.1	type III secretion system ATPase	Virulence	SPI-2	Protein	2e-68	42
lscN	AAO18044.1	LscN	Virulence	TTSS locus	Protein	9e-76	41
hrcN	AAR25633.1	type III secretion cytoplasmic ATPase HrcN	Not tested	Not named	Protein	2e-61	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fliI	YP_005267144.1	flagellum-specific ATP synthase	VFG2331	Protein	8e-142	66
fliI	YP_005267144.1	flagellum-specific ATP synthase	VFG2499	Protein	1e-124	57
fliI	YP_005267144.1	flagellum-specific ATP synthase	VFG1254	Protein	3e-112	56
fliI	YP_005267144.1	flagellum-specific ATP synthase	VFG0730	Protein	4e-75	46
fliI	YP_005267144.1	flagellum-specific ATP synthase	VFG0812	Protein	9e-75	46
fliI	YP_005267144.1	flagellum-specific ATP synthase	VFG2144	Protein	2e-83	43
fliI	YP_005267144.1	flagellum-specific ATP synthase	VFG0390	Protein	7e-76	42
fliI	YP_005267144.1	flagellum-specific ATP synthase	VFG0192	Protein	6e-82	42
fliI	YP_005267144.1	flagellum-specific ATP synthase	VFG0048	Protein	9e-78	42
fliI	YP_005267144.1	flagellum-specific ATP synthase	VFG0515	Protein	5e-68	42