Gene Information

Name : lolD (WIGMOR_0107)
Accession : YP_005267190.1
Strain : Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony)
Genome accession: NC_016893
Putative virulence/resistance : Virulence
Product : ATP-binding component of an ABC superfamily outer membrane-specific lipoprotein transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 112071 - 112751 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGAATAAAATACCAATTTTAAGTTGTGTAAATGTTACTAAAATATACAAAAATAAACTTATAATACTTAACAATATAAA
CTTATCTATTCAAAGATCAGAAACAATCGCTATTGTTGGTCGATCAGGATCAGGAAAAAGTACGTTATTATACATATTAA
GTGGATTAGACAATCCTACAAAAGGAGATGTTTTTTTTGAAGGCAAATCAATATATCGTTTATCTTCTTCACAAAGCGCT
GATTTAAGAAATAAAAGTTTTGGATTTATTTATCAATTTCATCATTTGCTTCCAGATTTTAATGTTTTAGAAAATGTTTT
AATGCCTGCTTTAATAGGGAAATTTAACATTAAAAATGCAAAAAAATCTGCATACGAAATTTTAGAACAATTAGGTTTAC
AAAAACGTGTGCATTATAAACCACATGAACTTTCTGGAGGAGAAAAACAAAGAGTAGCTATTGCAAGAGCTTTAATTAAC
AATCCAAAAATAATTTTTGCAGATGAACCTACTGGAAATTTAGATCAAATTTCTGCAAAAAAATTTTTTGCTTTATTAAA
TACTATAAATTTATATAAAAGTACTACTTTTTTGGTTGTTACACATTGTTTGAATTTTTCAAAAAAATTAAAAAAAGTGT
TAGAGATAAAAAATGGTATTTTATATAAAAAAGATTTCTAA

Protein sequence : 
MNKIPILSCVNVTKIYKNKLIILNNINLSIQRSETIAIVGRSGSGKSTLLYILSGLDNPTKGDVFFEGKSIYRLSSSQSA
DLRNKSFGFIYQFHHLLPDFNVLENVLMPALIGKFNIKNAKKSAYEILEQLGLQKRVHYKPHELSGGEKQRVAIARALIN
NPKIIFADEPTGNLDQISAKKFFALLNTINLYKSTTFLVVTHCLNFSKKLKKVLEIKNGILYKKDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_005267190.1 ATP-binding component of an ABC superfamily outer membrane-specific lipoprotein transporter NC_012469.1.7686878. Protein 2e-28 42
lolD YP_005267190.1 ATP-binding component of an ABC superfamily outer membrane-specific lipoprotein transporter CP001581.1.gene798.p Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_005267190.1 ATP-binding component of an ABC superfamily outer membrane-specific lipoprotein transporter VFG0869 Protein 1e-13 41