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Name : lysS (NOCYR_0067) Accession : YP_005261535.1 Strain : Nocardia cyriacigeorgica GUH-2 Genome accession: NC_016887 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 76246 - 79449 bp Length : 3204 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme DNA sequence : GTGCTCGGTGTGTTCGCGGTGGCCTGTCTGCTGTGGAGCCTGTCGCCCGCACTGCGCTACCTCACCCACGCACCCCGCCA CTACATCGACGACTACTACTTCGACGCCCCCGACACCAGCCTGGTGTGGGCGCTGGTGGTCGGACTGCTGGCGGCCGCGA CGGCCGGGCGTAAACGCATCGCATGGTGGTTGCTGGTCATCTACCTGGTGACCTGGGTGCTCGACAACGTCCTGACCTTC ATCGCCGATCGCGATGTGCACGCTCTGGTCGCGGCGGTGGTGCATGTGGCGGTGATCGGTGTGCTCATCGCCGCCTGGCC CGAGTTCTACACCCGGGTCCGCCGCGGTGCGGGCCGAAAAGCCCTGCTGGCCTTGGTGGGCGGGGCGGCCCTCGGCTGCC TGCTCGGCTGGGGCCTGGTGGAGATGTTCCCCGGCTCGCTGCCCGCGGGGGCGCAGCGCCCGCTGTGGGCGGTGTACCGG GTGACCGGCGCGATCCTGGTGGAGAACGAACAGTTCGACGGTTCGCCACACCATTTCGTGAACTTCCTGCTCGGCCTGTT CGGGGCGGTCGCGCTGCTCAGTGCCTTCATGGTGCTGCTGCGCTCCCAGCGCGCCGACAACGCCATGACCGGGCTCGACG AATCCGCGCTGCGCGGACTGCTGGCCCGCTCCGATGTGGAGGATTCGCTCGGCTATTTCGCCACCCGCCGCGACAAGGCG GTGGTGTTCGCGCCGAGCGGTAAGGCCGCCATCACCTACCGGGTGGAACTCGGCGTCTGCCTGGCCAGCGGCGACCCGAT CGGCATCAAGGAAGCGTGGCCGCAGGCGATCGACGCCTGGCTGCGGCTGGCCGACCAATTCGGCTGGGCGCCCGCGGTGA TGGGCGCGAGCGAACTCGGAGCGACCGCCTACCGCAGGGCCGGGCTGTCGGTGCTCCGACTCGGCGACGAGGCCGTGCTC GACACCAGGAACTTCTCCCTGGCCGGCGCCGAGATGAAGCCGGTCCGCCAAGCCGTCAACCGGTTGCGCAGGCAAGGCAT GGGAGTGCGGATCCGGCGCCACAGCGATATCCCCGCCGACGAATTCAGGCAGATCGTGGCACGGGCCGAGGCCTGGCGCG ACACCGAGAACGAGCGCGGCTTCTCGATGGCGCTGGGCCGCCTCGGCGACCCGCTCGACGGCGACTGCCTGCTGGTGGAG GCCGTCGACTCCGACGACCGGGTGCTGGCCATGCTGTCGATGGTGCCGTGGGGCCGCACCGGAGTGTCGCTGGAGTTGAT GCGACGCGACCCGCTCGGCCCCAACGGCGTGATGGAGTTGATGATCTCCCAGCTCGCGCTCACCTCCGACCAGTACGGCA TCACCAGGATCTCGCTGAACTTCGCGGTGTTTCGTTCGGTGTTCGAGGAGGGCGGGCGCATCGGCGCCGGGCCGATCCTG CGGGCCTGGCGCGGGGTGCTGCTGTTCTTCTCCCGGTGGTGGCAGCTCGAGGCGCTGTACCGGTCGAATGTGAAGTATCA GCCGATCTGGGTGCCGCGGTTCTTCCTGTTCGAGGAGCGCAGGCAGCTGCCGCGGGTGGCGATGGCCAGCGGCCTGGCCG AAGGCTTCCTGCCGCGGTTCGGCGCCGAACCCGACCCCGCCACCCACACCGGACGCCACAGCGCCGTCCCGCCGGCCATC ACCGGCCTGCACGCCGACGGCAGCCCGCCCGAACCGCCCGAATCCGAGGCCGAACTCCAGCTGGCCCGCAGGCCCGAGCA GGTGCGGGTGCGGATGAACAAGCTGGATCGACTGGCCGCCACCGGCATCGACGCCTACCCGGTGGCGTATCCGCCGACGC ACACCGTCGCGGCGGCACGCCGGTCACCGCGCGGGACCACGGTGCGCGTGTGCGGTCGCCTGCTGCGCATCCGCGACTAC GGCGGCGTGGTGTTCGCGGTGGTGCGCGACTGGTCCGACGACATCCAGCTGGTGCTCGACCGGGAACGCCTCGGCGCCAA GCGGTGCGCGGAGTTCAATGAGTTCTTCGACCTCGGCGATCTGATCGAGGTCAGCGGACGGATCGGGCGCAGCCGGCGCG GTGAGCTGTCGCTGCTGGTCGCGGACTGGCGGATGCTGGGCAAATGCCTACACCCGCTGCCGGACAAGTGGAAGGGCCTG GCCGATCCGGAGGCGCGGGTCCGCCAGCGCTACGTCGACATGATGATCAACCCGGAGACCCGCGATGTGCTGGCCAAGCG CAGTGCGGTGGTGCGGTCGCTGCGGGATTCGCTCACCGACTGGGGCTACATCGAGGTCGAGACGCCGATCCTGCAGCAGG TGCACGGCGGTGCCAACGCCACCCCGTTCCGCACCCACATCGACGCCTACGACCTGGACCTGTACCTGCGCATCGCCCCC GAGCTGTACCTGAAACGGCTGTGCGTGGGCGGGGTGGAGAAGGTGTTCGAGTTGGGCCGCACCTTCCGCAACGAGGGCGT GGACTTCAGCCACAACCCGGAGTTCACCATTCTGGAGGCCTACGAGGCGCACAGCGATTACGAGCGGATGATGCACCTGT GCCGTCAGCTGATCCAGAACGCGGCGCTGGCCGCCAACGGCGCGATGGTCGCCATGCGGCCCAAAGGCGACGGCACCTTC GAGGCCGTGGACATCTCCGGTGAATGGCCGGTCAAGACCGTGCACGGAGCCATCTCGCAGGCCATCGGCACCGAGATCAC CCCGCGCACCGACGTGACCCGGCTGCGAGAGTTGTGCGACGCCAACGCCATCCCGTACCAGCACGCCTGGGACGCGGGCC AGATCGTGCTGGAGATGTACGAGCACCTGGTCGAGGACCGCACCGCGGAACCCACCTTCTACATCGACTTCCCCACCTCC GTCTCCCCGCTGACCCGCAGCCACCGCCGCATCGCCGGCGTCGCCGAACGCTGGGACCTGGTGGCCTGGGGCGTCGAATT GGGCACCGCCTACAGCGAACTCACCGACCCGGTCGAACAACGGCGCCGGCTCACCGAACAGTCCATGCTGGCGGCGGGCG GCGACCCGGAGGCAATGGAGCTCGATGAAGACTTCCTGCAAGCCCTCGAACACGCCATGCCGCCCACCGGCGGACTCGGT ATGGGCGTCGACCGCATCGTCATGCTGATCACCGGCCGCAGCATCCGCGAGACGCTGCCGTTCCCGCTGGTCAAACCGCG TTGA Protein sequence : MLGVFAVACLLWSLSPALRYLTHAPRHYIDDYYFDAPDTSLVWALVVGLLAAATAGRKRIAWWLLVIYLVTWVLDNVLTF IADRDVHALVAAVVHVAVIGVLIAAWPEFYTRVRRGAGRKALLALVGGAALGCLLGWGLVEMFPGSLPAGAQRPLWAVYR VTGAILVENEQFDGSPHHFVNFLLGLFGAVALLSAFMVLLRSQRADNAMTGLDESALRGLLARSDVEDSLGYFATRRDKA VVFAPSGKAAITYRVELGVCLASGDPIGIKEAWPQAIDAWLRLADQFGWAPAVMGASELGATAYRRAGLSVLRLGDEAVL DTRNFSLAGAEMKPVRQAVNRLRRQGMGVRIRRHSDIPADEFRQIVARAEAWRDTENERGFSMALGRLGDPLDGDCLLVE AVDSDDRVLAMLSMVPWGRTGVSLELMRRDPLGPNGVMELMISQLALTSDQYGITRISLNFAVFRSVFEEGGRIGAGPIL RAWRGVLLFFSRWWQLEALYRSNVKYQPIWVPRFFLFEERRQLPRVAMASGLAEGFLPRFGAEPDPATHTGRHSAVPPAI TGLHADGSPPEPPESEAELQLARRPEQVRVRMNKLDRLAATGIDAYPVAYPPTHTVAAARRSPRGTTVRVCGRLLRIRDY GGVVFAVVRDWSDDIQLVLDRERLGAKRCAEFNEFFDLGDLIEVSGRIGRSRRGELSLLVADWRMLGKCLHPLPDKWKGL ADPEARVRQRYVDMMINPETRDVLAKRSAVVRSLRDSLTDWGYIEVETPILQQVHGGANATPFRTHIDAYDLDLYLRIAP ELYLKRLCVGGVEKVFELGRTFRNEGVDFSHNPEFTILEAYEAHSDYERMMHLCRQLIQNAALAANGAMVAMRPKGDGTF EAVDISGEWPVKTVHGAISQAIGTEITPRTDVTRLRELCDANAIPYQHAWDAGQIVLEMYEHLVEDRTAEPTFYIDFPTS VSPLTRSHRRIAGVAERWDLVAWGVELGTAYSELTDPVEQRRRLTEQSMLAAGGDPEAMELDEDFLQALEHAMPPTGGLG MGVDRIVMLITGRSIRETLPFPLVKPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 5e-158 | 43 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 5e-158 | 43 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 5e-158 | 43 |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 2e-158 | 43 |
