Gene Information

Name : NOCYR_5280 (NOCYR_5280)
Accession : YP_005266659.1
Strain : Nocardia cyriacigeorgica GUH-2
Genome accession: NC_016887
Putative virulence/resistance : Unknown
Product : aminotransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5878510 - 5879721 bp
Length : 1212 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence :
GTGCTGGAACAATCCACCAAGTTGCAGGACGTCGTCTACGAGATTCGTGGACCGGTACTCGCGCATGCGGCACGGCTGGA
GGCCGAGGGGCATCGCATCCTCAAGCTCAATATCGGCAACCCGGCGCCGTTCGGGTTCGAGGCCCCCGATGTGATCATGC
GCGACATCATCGCGGCGCTGCCGTATGCCCAGGGTTACTCCGAATCGAAGGGCATCCTGTCGGCCCGGCGCGCCATCGTC
ACCCGGTACGAGCTGGTGCCCGGCTTCCCGGAACTCGACGTGGACAGCGTCTACCTGGGCAACGGTGTTTCCGAGCTGAT
CACCATCACCATGCAGGCGCTGCTCAACAACGGTGACGAGGTGCTCATCCCCGCCCCGGACTATCCGCTGTGGACCGCGA
TGACCAGCCTGGCGGGCGGCACGCCGGTGCATTACCTGTGCGACGAGTCCAACGGCTGGCAGCCCGATATCGCCGACATC
GAGTCGAAGATCACCGACAAGACCAAGGCGCTGCTGGTGATCAACCCGAACAACCCCACCGGCGCGGTGTACTCGGCCGA
GGTGTTGCAGCAACTGGTCGACCTGGCGCGCAAACATCAGCTGTTGCTGCTGGCCGATGAGATCTACGACAAGATCCTCT
ACGACGACGCCAAGCACATTTCGCTGGCGACCCTCGCCCCCGATCTGCTCTGCCTCACCTTCAACGGTCTGTCCAAGGCC
TACCGGGTGGCGGGCTACCGATCTGGCTGGCTGGCGATCACCGGCCCGAAGGAGCACGCGGCCGGCTTCATCGAGGGCAT
CGACCTGCTGGCCTCGTCGCGGTTGTGCCCGAACGTGCCCGCTCAGCACGCCATCCAGGTGGCCCTCGGCGGACACCAGA
GCATCGAGGACCTGATCCTGCCCGGCGGCAGGCTGCTGGAACAGCGCGATGTGGCCTGGGAGCGGCTGAACATGATCCCC
GGCGTCTCCTGCGTCAAGCCCAAGGGTGCGCTCTACGCCTTCCCCCGGCTGGACCCGAACGTCTACGAGATCTACGACGA
CGCCAAGCTCATCCTCGATCTGCTGTTGCAGGAGAAGATCCTGATGGTGCAGGGCACCGGCTTCAACTGGCCCAACCACG
ACCACCTGCGCATCGTCACCCTGCCATGGGCCCGTGACCTGGCCGTCGCGATCGAACGCTTCGGCAACTTCCTGTCCAGC
TACCGGCAGTAG

Protein sequence :
MLEQSTKLQDVVYEIRGPVLAHAARLEAEGHRILKLNIGNPAPFGFEAPDVIMRDIIAALPYAQGYSESKGILSARRAIV
TRYELVPGFPELDVDSVYLGNGVSELITITMQALLNNGDEVLIPAPDYPLWTAMTSLAGGTPVHYLCDESNGWQPDIADI
ESKITDKTKALLVINPNNPTGAVYSAEVLQQLVDLARKHQLLLLADEIYDKILYDDAKHISLATLAPDLLCLTFNGLSKA
YRVAGYRSGWLAITGPKEHAAGFIEGIDLLASSRLCPNVPAQHAIQVALGGHQSIEDLILPGGRLLEQRDVAWERLNMIP
GVSCVKPKGALYAFPRLDPNVYEIYDDAKLILDLLLQEKILMVQGTGFNWPNHDHLRIVTLPWARDLAVAIERFGNFLSS
YRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-142 75
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-142 75
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 4e-142 75
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-142 75