Gene Information

Name : NOCYR_4716 (NOCYR_4716)
Accession : YP_005266105.1
Strain : Nocardia cyriacigeorgica GUH-2
Genome accession: NC_016887
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5214653 - 5215537 bp
Length : 885 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence : 
GTGGAGTCTATCTGCGCCGCGCTCGGCGAGCTCGGCGTGAACCTCGCCCCCTCGACCTACTACGAACACCGCAACCGGGT
CCCGTCGGCCCGCCGGCGCCGCGATGAGGCGCTGACCGCCCAGATCCGGCGGGTGCACCGGGAGAACTTCGGTGTCTACG
GGGCCCGCAAGGTATGGCTGCAGCTCAACCGTGAAGGCTATCCGGTGGCCCGTTGCACGGTGGAACGGTTGATGCGCGAG
GCCGGGCTGCGCGGGATCTCGCGTGGCCGGGCCAAGCGCACCACGATCGCCGATCCGGTCGCACCCACGGCTGCGGATCT
GGTGCAACGCCGGTTCGCGCCGGCAGCGCCGAACCGGTTGTGGGTCTCAGACATCACGTATGTGTCGACGTGGTCGGGGT
GGGTGTATGTGGCTTTCGTGATCGACGCTTATGCCCGCCGGATCCTGGGCTGGCGGCTGTCGACGTCGATGACCACGACG
CTGGTGCTGGACGCGATCGAACACGCGATCTGGACCCGTGAACGCGAAGGATGGAACGTGAAAGATGTTGTGCACCACAC
GGATAGGGGATCTCAATATACGGCTATCGCGTTCACCGAGCGGCTCGCGGAGGCCGGGATCCAGCCCAGTGTCGGTGCGG
TCGGATCGAGCTACGACAACGCGCTGGCCGAAACGATCAACGGCCTCTACAAAACCGAGCTGATCAAACCACGAGGCCCG
TGGCGCAGCGTCGACCAGGTCGAGTTCGCCACCGCCGAATGGGTCGACTGGTTCAACCACCGCCGTCTCTACCAGTACTG
CGGCGACCTACCACCGGCCGAGATGGAAGCAGCCCACTACGCTCAACACCCAGCCCAGCAACCCGCCGGGCTGTCACACC
AATAG

Protein sequence : 
MESICAALGELGVNLAPSTYYEHRNRVPSARRRRDEALTAQIRRVHRENFGVYGARKVWLQLNREGYPVARCTVERLMRE
AGLRGISRGRAKRTTIADPVAPTAADLVQRRFAPAAPNRLWVSDITYVSTWSGWVYVAFVIDAYARRILGWRLSTSMTTT
LVLDAIEHAIWTREREGWNVKDVVHHTDRGSQYTAIAFTERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPRGP
WRSVDQVEFATAEWVDWFNHRRLYQYCGDLPPAEMEAAHYAQHPAQQPAGLSHQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 1e-55 56
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 5e-48 55
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 2e-48 55
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-59 53
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 1e-59 53
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 2e-56 52
Z1221 NP_286756.1 transposase Not tested TAI Protein 4e-59 52
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 4e-59 52
Z1198 NP_286733.1 transposase Not tested TAI Protein 3e-59 52
Z1638 NP_287141.1 transposase Not tested TAI Protein 3e-59 52
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 7e-59 52
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 3e-59 52
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 7e-59 52
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 9e-43 51
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 8e-57 51
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 8e-57 51
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 8e-57 51
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 4e-57 51
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 1e-58 51
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 1e-58 51
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 1e-55 50
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 7e-51 49
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 2e-39 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NOCYR_4716 YP_005266105.1 transposase VFG1602 Protein 6e-56 50