Gene Information

Name : NOCYR_3980 (NOCYR_3980)
Accession : YP_005265375.1
Strain : Nocardia cyriacigeorgica GUH-2
Genome accession: NC_016887
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4383099 - 4383806 bp
Length : 708 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter

DNA sequence : 
ATGACGCAACCAGCCGTGCTGGAACTGTCGAACGTCAACAAGGAGTATCTGGTCGGCGATCAAGTGGTACGCGCCCTCGA
CGGGATCAGCTTGAGCATCGCGGCGGGCGAGTTCACCTCGATCATCGGCCCGTCCGGCTCGGGCAAGAGCACCCTGCTGC
ATCTGCTCGGCGCGCTCGACAGCCCCGACTCGGGGTCGATCCGATTCCAGGGCGAGGAGATCGGCAGCCTGGACGAGGAG
CGGCAGTCCGAATTCCGCAGGCACCGCGTCGGTTTCGTATTCCAGTTCTTCAACCTGCTGCCCACGCTGTCGGCGTGGGA
GAACGTCGCCATCCCGAAGCTGCTCGACGGCACCGGATTACGCAAGGCCAAACCGCGCGCCCTGGAACTGCTGGAACGCG
TCGGGCTGGCCGAGCGGGCCGAGCACCGGCCCGCCGAATTGTCCGGCGGGCAGATGCAGCGCGTGGCGGTGGCGCGGTCG
CTGATCATGGATCCGCCGCTCATCCTGGCCGACGAGCCCACCGGCAACCTCGATTCCAAAACCGGCGCCTCGATCCTCGA
ATTGCTCGGCGAGGTCGCCGGATCCGGCAACTCGGTGGTGATGGTGACCCACGATATGGGCGCGGTCCGCTACTGCGACC
GGGTGATCACCCTGCGCGACGGCAAGATCGGCTCCGACGAGCGCGCCGAGCGGACGGTCAACGCATGA

Protein sequence : 
MTQPAVLELSNVNKEYLVGDQVVRALDGISLSIAAGEFTSIIGPSGSGKSTLLHLLGALDSPDSGSIRFQGEEIGSLDEE
RQSEFRRHRVGFVFQFFNLLPTLSAWENVAIPKLLDGTGLRKAKPRALELLERVGLAERAEHRPAELSGGQMQRVAVARS
LIMDPPLILADEPTGNLDSKTGASILELLGEVAGSGNSVVMVTHDMGAVRYCDRVITLRDGKIGSDERAERTVNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-36 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NOCYR_3980 YP_005265375.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-42 51
NOCYR_3980 YP_005265375.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-48 47
NOCYR_3980 YP_005265375.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-40 45
NOCYR_3980 YP_005265375.1 putative ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-42 43