Gene Information

Name : NOCYR_3863 (NOCYR_3863)
Accession : YP_005265262.1
Strain : Nocardia cyriacigeorgica GUH-2
Genome accession: NC_016887
Putative virulence/resistance : Unknown
Product : RNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4250562 - 4252943 bp
Length : 2382 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7704259, 8755871; Product type pf : putative factor

DNA sequence :
GTGGTGTCCGGTACCGTCAGCCGTCGCATCGCCGACGAGCTGGCGGTGCGCGAGAATCAGGTCCGCGCCGCCGTCGAACT
GCTCGACGCCGGCTCCACCGTTCCGTTCATCGCCCGCTACCGCAAAGAGGTCACCGGCGGCCTGGACGACGCCCAGCTGC
GCACCCTCGAGGAACGGCTGCACTACCTGCGCGAACTCGACGAGCGCCGGGCCGCGATCGTGGAATCGATTCGCGCCCAG
GGCAAACTCGACGACGAACTGCACCGCCAGATCATGCTGGCCGAGACCAAGGCCCGCCTGGAAGACATCTACCTGCCCTA
CAAGCCCAAGCGGCGCACCAAGGCCCAGATCGCCCGTGAGGCCGGCCACGAACCCGTCGCCGACGCACTGATCGGCGACC
CGTCCACCGACCCGGCGCAGTACACCGCCGAACAGCTCGACGGTGCGCGCGCCATCCTGGTCGAACGCTTCGCCGAAGAC
GCCGACCTGGTCGGTGAGCTGCGTGAACTCATGTGGCAGCGCGGCCAGATCCGCTCCACCGTGCGGGCCGGCAAGGAAGA
GGCGGGCGCGAAGTTCGCCGACTATTTCGAATTCAGCGAGCCGTTCGGCAAGCTGCCCTCGCACCGCATCCTCGCGCTGC
TGCGCGGTGAGAAGGAAGAGGTGCTCACCCTGCACCTGGAAGCCGACGCCGAGGAACCGCAGCCGGGCGAGCGCACCATC
TACGAAGGCCGCATCGCGGTCCGCTTCGGCATCGCCGACCAGGGCCGCCCCGCCGACACCTGGCTGCTCGACACCGTGCG
CTGGGCCTGGCGCACCAAGCTCCAGGTGAGCCTCGGCATCGACACCCGGATGCGGTTGCGGCAGGCGGCCGAGAAGGACG
CCGTCGAGGTCTTCGCCGCCAACCTGCGCGATCTGCTGCTGGCCGCGCCCGCGGGCACCCGCACCACCATGGGCCTGGAC
CCGGGTTATCGCACCGGCGTCAAGGTGGCCGTGGTCGACGGCACCGGCAAGGTGGTCGCCACCGAGGTCATCTACCCGCA
CAAACCGCAGGGCCAGACCGAGAAATCGCTGGCCGTGCTGGCCGCGTTGGTCGCGCGGTTCGGGGTGGAACTGATCGCCA
TCGGCAACGGCACCGCCTCGCGCGAAACCGACGCCCTCGCCGCCGAACTCATCGCCCGCATCCCGGAGAACAAGCCCACC
AAGATCGTGGTCTCCGAGGCCGGCGCCTCGGTGTATTCGGCCTCGGCCTATGCCTCCCAGGAACTGCCCGATCTGGACGT
GTCGCTGCGCGGCGCGGTGTCCATCGCGCGCCGGTTGCAGGACCCGCTGGCCGAGCTGGTGAAGATCGACCCGAAGTCCA
TCGGGGTGGGCCAGTACCAGCACGACGTCTCCGAGACGCTGCTGGCCCGCTCGCTCGGCGCCGTGGTCGAGGACGCGGTG
AACGCGGTCGGTGTGGACGTCAACACCGCCTCGGTGCCGCTGCTGTCGCGGGTCTCCGGCATCGCCGGATCGCTGGCCGA
AAGCATTGTCGCGCACCGCGATCAGCACGGCCCGTTCCGCAGCCGCAGCGCACTGCTGGACGTGGCGCGACTGGGCCCCA
AGGCCTTCGAACAGTGCGCGGGCTTCCTGCGCATCCGCGGCGGCGACGACCCACTCGACAACTCCGCGGTGCACCCCGAG
GCGTACCCGGTGGTGCGGCGGATCCTCAACAGCACCGGCCGCCCGATCACCGAGATCATCGGCAACACCAGCGCGCTGCG
GGCGCTGAGCCCGGCGGAGTTCACGGATGAGCGCTTCGGTGTCCCCACCGTCACCGACATCATCAGCGAGCTGGAGAAGC
CGGGCCGCGACCCGCGTCCGGAGTTCAAGACCGCCGAATTCGCCGCGGGTGTGGAGAAGGTCGCTGATCTAGAACCCGGC
ATGGTGCTCGAGGGCGTGGTCACCAATGTCGCGGCCTTCGGCGCGTTCGTCGACGTCGGCGTGCATCAGGACGGGCTGGT
GCACGTCTCGGCCATGTCGCACAATTTCGTGAAGGATCCGCGCGAGGTCGTGAAATCGGGGGACGTGGTCAAGGTGAAGG
TGCTCGAGGTCGACGTCGCCCGTCAGCGCATCGGCCTGTCGCTGCGCCTGGACGACGAACCCGGCGCCGGTAAGCCCGAA
CGCGGTCGCGGGCCGGGGGAGCGCGGTCGCGGCGCCGACGGACAGGCCGGGCCGGGACGGGGTCAGGGCGGCAACCGTCA
GGGGCAGAACCGGGGTCAGGGGCGTCAAGGGCAGGGTCAGGGGCGGCAGGGCCAAGGCCAGGGCCGCAATCAGCGTCGCG
AGGCCGCCCCGGCGAACGGGGCCATGGCCGACGCGCTGCGCCGGGCCGGTTTCGGGAAGTAG

Protein sequence :
MVSGTVSRRIADELAVRENQVRAAVELLDAGSTVPFIARYRKEVTGGLDDAQLRTLEERLHYLRELDERRAAIVESIRAQ
GKLDDELHRQIMLAETKARLEDIYLPYKPKRRTKAQIAREAGHEPVADALIGDPSTDPAQYTAEQLDGARAILVERFAED
ADLVGELRELMWQRGQIRSTVRAGKEEAGAKFADYFEFSEPFGKLPSHRILALLRGEKEEVLTLHLEADAEEPQPGERTI
YEGRIAVRFGIADQGRPADTWLLDTVRWAWRTKLQVSLGIDTRMRLRQAAEKDAVEVFAANLRDLLLAAPAGTRTTMGLD
PGYRTGVKVAVVDGTGKVVATEVIYPHKPQGQTEKSLAVLAALVARFGVELIAIGNGTASRETDALAAELIARIPENKPT
KIVVSEAGASVYSASAYASQELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSETLLARSLGAVVEDAV
NAVGVDVNTASVPLLSRVSGIAGSLAESIVAHRDQHGPFRSRSALLDVARLGPKAFEQCAGFLRIRGGDDPLDNSAVHPE
AYPVVRRILNSTGRPITEIIGNTSALRALSPAEFTDERFGVPTVTDIISELEKPGRDPRPEFKTAEFAAGVEKVADLEPG
MVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSHNFVKDPREVVKSGDVVKVKVLEVDVARQRIGLSLRLDDEPGAGKPE
RGRGPGERGRGADGQAGPGRGQGGNRQGQNRGQGRQGQGQGRQGQGQGRNQRREAAPANGAMADALRRAGFGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 61