Gene Information

Name : pdxS (NOCYR_3604)
Accession : YP_005265004.1
Strain : Nocardia cyriacigeorgica GUH-2
Genome accession: NC_016887
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3982329 - 3983249 bp
Length : 921 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence :
GTGACCACGCCCGAGACCACCCAGACCACCGAGGCGACCCGTGAGGCGGGTACCGCCCGCGTGAAGCGCGGCATGGCCGA
AATGCTCAAGGGCGGGGTGATCATGGACGTCGTCACCCCGGAGCAGGCCAAGATCGCCGAAGACGCCGGCGCCGTCGCGG
TCATGGCCCTCGAGCGCGTGCCCGCCGATATCCGCGCCCAGGGCGGGGTGTCCCGGATGAGTGATCCGGACATGATCGAC
GGCATCATCAACGCCGTCTCGATCCCGGTGATGGCCAAGGCCCGCATCGGCCACTTCGTGGAGGCGCAGATCCTGCAGAG
CCTCGGCGTCGACTACATCGACGAGTCCGAGGTGCTGACCCCGGCCGACTACACCAACCACATCGACAAGTGGAACTTCA
CCGTTCCGTTCGTCTGTGGCGCCACCAACCTCGGCGAGGCGCTGCGCCGCATCACCGAGGGCGCGGCCATGATCCGCTCC
AAGGGTGAGGCCGGCACCGGTGACGTCTCCAACGCCACCACCCACATGCGCCAGATCCGCCAGGAGATCCGCAAGCTGTC
GGCGCTGCCCGCCGATGAGCTCTACGTCGCCGCCAAGGAGCTGCAGGCGCCCTACGAGCTGGTCCGCGAGGTCGCCGAGA
CCGGCAAGCTGCCGGTGGTGCTGTTCACCGCGGGCGGTATCGCCACCCCGGCCGATGCCGCGATGATGATGCAGCTCGGC
GCCGAGGGCGTGTTCGTGGGCTCGGGCATCTTCAAGTCGGGCAACCCGGCCCAGCGCGCCGCCGCCATCGTCAAGGCCAC
CACCTTCTACGACGACGCCGACGTGCTGGCCAAGGTCTCGCGTGGCCTGGGTGAGGCCATGGTCGGTATCAACGTCGAGG
AGATCGCGCAGCCGCATCGGCTGGCCGAGCGCGGTTGGTGA

Protein sequence :
MTTPETTQTTEATREAGTARVKRGMAEMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPADIRAQGGVSRMSDPDMID
GIINAVSIPVMAKARIGHFVEAQILQSLGVDYIDESEVLTPADYTNHIDKWNFTVPFVCGATNLGEALRRITEGAAMIRS
KGEAGTGDVSNATTHMRQIRQEIRKLSALPADELYVAAKELQAPYELVREVAETGKLPVVLFTAGGIATPADAAMMMQLG
AEGVFVGSGIFKSGNPAQRAAAIVKATTFYDDADVLAKVSRGLGEAMVGINVEEIAQPHRLAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 5e-115 84
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 9e-115 84
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-115 83