Gene Information

Name : NOCYR_0332 (NOCYR_0332)
Accession : YP_005261796.1
Strain : Nocardia cyriacigeorgica GUH-2
Genome accession: NC_016887
Putative virulence/resistance : Unknown
Product : putative periplasmic dipeptide-binding lipoprotein dppA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 377549 - 379168 bp
Length : 1620 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pc : putative carrier

DNA sequence :
ATGCGGATTCCGGCCTGGCTCGCGACTGTGGTGCTGGCCCTGCTGTGCGTCGCGACCCTGCCCGCCTGCACCATCACCCC
GGCCCTCGGCGATTCCATCGCGGTCAACGGCAGCGAACCGCAGAACCCGCTGGTGCCGTCGAATACCAATGAGAACGGCG
GCGGCCGCATCGTCGACCGGCTCTTCGCCGGGTTGCGCCGCATCGACGCCGCGGGTCGGCTGCACGACGAGGTCGCCCAA
TCCATCGAGACCACCGACCAGCAGCACTACCTGATCAGGCTGAAGCCCGGCTGGACCTTCAGCGATGGTTCCCCGGTCAC
CGCGCACTCGTTCGTCGACGCGTGGAATTTCGGCGCACTGATCACCAACGCGCAGTTGCAGAGCTACACCTACGAGCCGA
TCGTCGGCTTCGACGACGTACAGGCCGATCCACCACGCGCGCAGACGATGTCGGGGCTGCGGGTGCTCGACGACCTCACC
TTCACCGTCGATCTGAAGGCGCCGACCATCGACTTCCGCACCCGGCTGGCCTACGCGCCGTTCTATCCGCTGCCCGAGGT
GGCGTTCGACGACATCGAGGCCTTCGGACAGCGCCCGATCGGCAATGGCCCGTACCGCTTCGCCGACGGCGACGCCTGGC
AGCACGATGTGAAGCTGGACCTGGTGCCCAACGAGAGCTACCGGGGCGGGCGCCCGGCCAAGAACAAGGGCCTGACCTTC
GTGTTCTACTCCAACTTCGACGCCGCCTATTCGGATCTGCTGGCCGGCAACCTCGATGTGCTCGATACCGTCCCGCCCAG
TGCGCTCACCGTCGTCGACGACGATCTCGGCGAGCGCGCCGTCTCCGCGCCCACCGCGCAGAGCCAGTGGATCGGCACCC
AGCCCGGCCTACCGCATTTCGACGGTGAGGAGGGCAGGTTGCGCCGCCACGCCATCTCCATGGCCATTCAGCGGGAACGC
ATCGGCGACAAGATCTTTCGCGGTACCCGCAAACCCGCGCGCGACTACACCTCGCGGGTGCTGCCCGGCTACAACCCGAA
TCTGCCCGGCTCCGAGGTCCTCGAATACAACCCCGAGCGAGCGCGTGAGTTGTGGGCGCAGGCCGATGAGATCTCGCCCT
GGAGCGGACGATTCGAGATCGCCTACAACGCCGACGGCGGCCATCAGGCCTGGATCGACGCGGTGGCCAACAGCATCAAG
AACACCCTGGGCATCGAAGCGGTCGGCGCCGCCCTGCCGACCTTCAAGCAGCTGCGCGACCACGTCACCGAGCGGACCAT
CGGCAAGGCGTTCCGGTCCGGCTGGCAGGGCGATTATCCGACCATGTTGCAGTTCCTCGAACCGGGCTTCCTCAGCAACT
CCGCCACCAACGATTTCGACTATCACAACCCGGAATTCGACGCGCTGATCGCCGCCGCGGAGGCCGCGCCGTCCGAGGAG
CGGTCCTGGGAGCTGGTCGGGCAGGCGCAGACGGTGCTGCTGCACGACCTGCCGACCATCCCGGTCTTCGACTACGTGAA
CTCCGCCGGGTACTCCGAGCGGGTGCGCAATGTCGCCTTCGCCTGGAACGGCCTGGCCGACTTCGAGAACATCGAACTGC
GCCCAGCCGCCGGAGAATGA

Protein sequence :
MRIPAWLATVVLALLCVATLPACTITPALGDSIAVNGSEPQNPLVPSNTNENGGGRIVDRLFAGLRRIDAAGRLHDEVAQ
SIETTDQQHYLIRLKPGWTFSDGSPVTAHSFVDAWNFGALITNAQLQSYTYEPIVGFDDVQADPPRAQTMSGLRVLDDLT
FTVDLKAPTIDFRTRLAYAPFYPLPEVAFDDIEAFGQRPIGNGPYRFADGDAWQHDVKLDLVPNESYRGGRPAKNKGLTF
VFYSNFDAAYSDLLAGNLDVLDTVPPSALTVVDDDLGERAVSAPTAQSQWIGTQPGLPHFDGEEGRLRRHAISMAIQRER
IGDKIFRGTRKPARDYTSRVLPGYNPNLPGSEVLEYNPERARELWAQADEISPWSGRFEIAYNADGGHQAWIDAVANSIK
NTLGIEAVGAALPTFKQLRDHVTERTIGKAFRSGWQGDYPTMLQFLEPGFLSNSATNDFDYHNPEFDALIAAAEAAPSEE
RSWELVGQAQTVLLHDLPTIPVFDYVNSAGYSERVRNVAFAWNGLADFENIELRPAAGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0922 YP_005160014.1 putative peptide transport system secreted protein Not tested Not named Protein 2e-117 51