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Name : NOCYR_3213 (NOCYR_3213) Accession : YP_005264614.1 Strain : Nocardia cyriacigeorgica GUH-2 Genome accession: NC_016887 Putative virulence/resistance : Unknown Product : ABC transporter ATPase/permease Function : - COG functional category : - COG ID : - EC number : - Position : 3569086 - 3570852 bp Length : 1767 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter DNA sequence : ATGAGTACTGCGGTATCGGAGCCGATCACGGCCGTCGCGGAGCCAGCGGCCGCCACGGGACTGCGCGCGGTGCTGTCACC TGCGCGCCGGCCACTGGCCGTGGCGGCCGCCCTTCAGGTCGTCGGTGCGCTGGCCGCCATGGCGCCCTACCTCGCGGTCG TCGGGATCGCACGCGAACTGCTCGCCGACGCGCCGGCCGACCGCGGCGCGGTGTGGAGCTGGGTCGTCGTCGCAGGCCTC GGCTTCCTGATTCGCACCGGCTGCGCGGCCGCCGCGTACACCATCAGCCATCGCGCCGACGCCGACGTCGCCGCCGGACT GCGCCGTGCCATGGCCGATCGGCTCGGCCGGGTCCCGCTCGGCTGGTTCACCGCGCGCAGCTCCGGACGGGTGAAACGGG CGCTGACCGACGACGTCACCGCCATCCACCACCTGGTGGCGCACGCGATCAACGACCTGGTCGCCGCCGTCGTGACCCCG GTGGTGGCGCTGGTGTACCTGTTCGTGCTGGATTGGCGGCTGGCGCTGGTGTGCCTGGTGCCGTTGATCGCCTGGTTCGT CCTCACCGCGGTGATGTCGCGGGATGAAGCTGCCCGGATGGCGCGCTGGAACGCCGAACTCGAGAAGGTCGACGCCGCCG TTATCGAATACGTCGATGGCATCGCGGTGGTGAAGGCGTTCGGCCAGGCCGACCGCGCACAGGATCGCTACCGGCGCGCC GGCGACGACCTCGCCCGCTTCCTCGGCGAATGGATCGGCCCGATGCACCGGCTCGAAGCGGTGGCCTCGGTGTTGATCTC GCCGCCGGTACTGCTGGTCGTGGCTCTGGGCGCAGGGGTATGGCTCGGTACCGAACCGGCCGAGCTCATCGCCTTCACCA TGCTGGTGGTCGGTTTGGGCGCGCCGGTGCTGGCGATCGGATTCGGCGCGCTGGCCATGCAGGTGGCGCGCGCCGCCGCC GACCGGATCGCCGGCGTGCTCGCCACGCCCGAACTGCCACACGCGCGAGTCCCGGTGGTGCCCAACGGTACTCGGGTCGA CTTCGAGGGGGTCCGGTTCTCCTACGACGGACGCGGATACGCCCTCGACGGCATCGACCTCACGCTGGCGCCCGGCACCG TCACCGCGCTTGTCGGCGCCTCCGGGTCGGGGAAATCGACGCTGGCCCGGCTGCTGCCGCGATTCTGGGATGTCGACGCG GGATCGGTGCGCATCGGCGGCGTCGACGTCCGCGATATCGCCGAACACGAGCTGTACCGCCACATCGGGTTCGTCTTCCA GGAGACCTCACTGCTGCGCACCTCGATTCGCGACAATATCGCGCTGGCTCGGCCGGCGGCCGATGCGGCCACGATCGAAG CGGCAGCGCGCGCGGCGGCCATCCACGAGCGGATCCTCACGCTGCCGCGCGGCTACGACAGCGAGGTCGGGGTCGACGCG CAGCTGTCCGGCGGCGAAGCCCAGCGCATCGCGATCGCCCGCGCGATCGTCGCCGACGCACCGATCCTGGTGCTGGACGA GGCGACCGCCTTCGCCGACCCGGAATCGGAAGCGGCGGTGCAGGACGCGCTGTCGCGGCTGATCGCGGGCCGCACCCTGC TGGTGATCGCCCACCGCCTGCACACCATCCGCGGTGCCGATCGCATCGTGGTGCTCTCCCGCGGGCGCGTGGTGGAGACC GGCCATCATGACGAATTGCTCGCCGCCGCCGGCGAGTACGCGCGGATGTGGGCCGCCCAAACACTGTCGAAGGAGCTGTC CCGATGA Protein sequence : MSTAVSEPITAVAEPAAATGLRAVLSPARRPLAVAAALQVVGALAAMAPYLAVVGIARELLADAPADRGAVWSWVVVAGL GFLIRTGCAAAAYTISHRADADVAAGLRRAMADRLGRVPLGWFTARSSGRVKRALTDDVTAIHHLVAHAINDLVAAVVTP VVALVYLFVLDWRLALVCLVPLIAWFVLTAVMSRDEAARMARWNAELEKVDAAVIEYVDGIAVVKAFGQADRAQDRYRRA GDDLARFLGEWIGPMHRLEAVASVLISPPVLLVVALGAGVWLGTEPAELIAFTMLVVGLGAPVLAIGFGALAMQVARAAA DRIAGVLATPELPHARVPVVPNGTRVDFEGVRFSYDGRGYALDGIDLTLAPGTVTALVGASGSGKSTLARLLPRFWDVDA GSVRIGGVDVRDIAEHELYRHIGFVFQETSLLRTSIRDNIALARPAADAATIEAAARAAAIHERILTLPRGYDSEVGVDA QLSGGEAQRIAIARAIVADAPILVLDEATAFADPESEAAVQDALSRLIAGRTLLVIAHRLHTIRGADRIVVLSRGRVVET GHHDELLAAAGEYARMWAAQTLSKELSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp2K | YP_005163491.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 4e-69 | 43 |
| irp2K | YP_005134503.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 4e-69 | 43 |
