Gene Information

Name : NOCYR_2892 (NOCYR_2892)
Accession : YP_005264297.1
Strain : Nocardia cyriacigeorgica GUH-2
Genome accession: NC_016887
Putative virulence/resistance : Unknown
Product : Transposase for IS2606
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3212657 - 3213949 bp
Length : 1293 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence :
GTGAGTGACACCGCAGCCGAGGAAGAGGCCGTGACCGGGCAGGTCGGCGCGTCTGGTGCGGCGGGGGTTTCGGATGAGCA
GTTGATCGCGATGCTGGTCGATCGGGCTCGCACCGACGGCCTGCAATTGACCGGTGAGGGCGGGCTGCTGCAGCAGCTGA
CCAAGCGGGTGCTCGAGTCCGCGCTCGAGGGCGAGGTCACCGACCATCTCGGCTACGACAAGCACGATCCCGCCGGCCGT
AGCAGCGGTAACAGCCGTAACGGGACGAGGTCGAAGACGGTGACCACCGACATCGGGCCTGTGCGGGTGAAGGTGCCGCG
TGATACTGCCGGCACGTTCGAGCCGCAGATCGTGCGCAAACGGCAGCGCCGGTTGTCGGGGGTGGACGAGATGGTGTTGT
CGTTGTCGGCCAAGGGCCTGACCCACGGTGAGATCAGCGCGCACCTGGCCGAGGTCTACGGTGCCGAGGTGTCGCGGCAG
ACGATCTCGGTCATCACCGACAAGGTGATCGAGGGGATGGCCGAATGGCAGAACCGGCCGCTGGACCCGGTGTATCCCGT
CGTGTTCGTGGACGCTATCAATGTGAAGATCCGCGACGGCCAGGTCGCGAACCGGCCCATCTATGTGGCGATGGCGGTCA
CCGTCGAGGGACATCGCGACATCCTCGGAATCTGGGCCGGCGACGGCGGTGAAGGCGCCAAGTACTGGCTGCACGTGTTC
ACCGAGCTGAAGAACCGCGGCGTGGCCGACGTGCTGATGCTCGTCTGTGACGGCCTCAAAGGGCTACCAGAGGCAGTGGA
GGCGGTCTGGCCGAAGACCGTCGTGCAAACCTGCATCATTCACCTGCTGCGCAATAGTTTCCGCTACGCCAGCCGTCAGG
ACTGGGACAAGATCGCCAAAGCGTTGAAACCGGTCTACACCGCAGCGACCGAGGACGCGGCCAGCGAGCGGTTCCTCGAG
TTCTCCGAGGCTTGGGGCGGCAAGTATCCCGCGATCGTGAAGCTCTGGTCCGATGCGTGGGCCGAATTCGTGCCGTTCCT
GGCCTTCGACGTCGAGATCCGCAAGGTCATCTGCTCGACGAACGCGATCGAGTCGGTCAACGCCCGCATCCGCAAAGCCG
TCCGCGCCCGAGGACATTTCCCGAACGAGACCGCCGCGCTGAAGTGCGTCTACATGGCATTGATGAGTCTCGATCCGACC
GGCAAGGGCCGAAAACGATGGACCATGCGCTGGAAGGCCCCGCTGAACGCCTTCCAGATCGCCTTCGAAGGCCGCATGAC
CCCCACCAGCTGA

Protein sequence :
MSDTAAEEEAVTGQVGASGAAGVSDEQLIAMLVDRARTDGLQLTGEGGLLQQLTKRVLESALEGEVTDHLGYDKHDPAGR
SSGNSRNGTRSKTVTTDIGPVRVKVPRDTAGTFEPQIVRKRQRRLSGVDEMVLSLSAKGLTHGEISAHLAEVYGAEVSRQ
TISVITDKVIEGMAEWQNRPLDPVYPVVFVDAINVKIRDGQVANRPIYVAMAVTVEGHRDILGIWAGDGGEGAKYWLHVF
TELKNRGVADVLMLVCDGLKGLPEAVEAVWPKTVVQTCIIHLLRNSFRYASRQDWDKIAKALKPVYTAATEDAASERFLE
FSEAWGGKYPAIVKLWSDAWAEFVPFLAFDVEIRKVICSTNAIESVNARIRKAVRARGHFPNETAALKCVYMALMSLDPT
GKGRKRWTMRWKAPLNAFQIAFEGRMTPTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 1e-76 49
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 8e-74 49
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 2e-71 48
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 3e-77 45