Gene Information

Name : NOCYR_2864 (NOCYR_2864)
Accession : YP_005264269.1
Strain : Nocardia cyriacigeorgica GUH-2
Genome accession: NC_016887
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3173609 - 3174376 bp
Length : 768 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence :
GTGGAGATCACGCGGGTGCACCGCGAGAACTACGGCGTCTACGGCGCCCGGAAAGTATGGCTGCAACTCAACCGTGAGGG
CATCGAGGTGGCTCGATGCACCGTCGAGCGGCTGATGCGCCGGCACGGGCTACGAGGCGCGGTCCGCGGCCGGGTCAAAC
GCACCACGATCGCCGATCCGGCCGCGGAGCGGCCGCAGGATCTGGTGCGACGCAAGTTCGCGCCGGCAGCACCGAACCGG
CTGTGGGTAGCCGACATGACCTATGTGTCGACCTGGTCGGGCTGGGTCTACGTGGCGTTCGTGATCGACGCCTACGCGCG
CAGGATCATCGGCTGGCGCACCGGCACCACGATGACGACAGAGCTGGTGCTCGACGCGATCGAGCACGCGATATGGACCC
GGGAACGAGCGGGCTGGGACGTGAAAGATGTTGTCCACCACACAGATAGGGGCGCTCAATACACCTCGATCGCCTTCTCT
GAGCGGCTCGCAGAGGCCGGGATCCAGCCCAGCGTCGGTGCGGTGGGATCGAGCTACGACAACGCCCTCGCCGAGACGAT
CAACGGCCTCTACAAGACCGAGGTGATCAAACCCCGCGGCCCGTGGCGCAACGCAGATCAGGTCGAGTTCGCCACCGCCG
AATGGGTCGATTGGTTCAACCACCGGCGCCTCTACCAGTACTGCGGCGACGTGCCACCGGCAGAGATGGAGGCCGCCTAC
TACGCTCAACACCCAGCCCAGCACCTGGCCGGGCTGTCACATCAGTAA

Protein sequence :
MEITRVHRENYGVYGARKVWLQLNREGIEVARCTVERLMRRHGLRGAVRGRVKRTTIADPAAERPQDLVRRKFAPAAPNR
LWVADMTYVSTWSGWVYVAFVIDAYARRIIGWRTGTTMTTELVLDAIEHAIWTRERAGWDVKDVVHHTDRGAQYTSIAFS
ERLAEAGIQPSVGAVGSSYDNALAETINGLYKTEVIKPRGPWRNADQVEFATAEWVDWFNHRRLYQYCGDVPPAEMEAAY
YAQHPAQHLAGLSHQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 4e-59 56
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 6e-59 56
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-58 56
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-58 56
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 4e-59 55
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-58 55
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 4e-58 55
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 6e-58 55
Z1221 NP_286756.1 transposase Not tested TAI Protein 2e-58 55
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 2e-58 55
Z1198 NP_286733.1 transposase Not tested TAI Protein 1e-58 55
Z1638 NP_287141.1 transposase Not tested TAI Protein 1e-58 55
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 6e-51 54
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 1e-56 54
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 7e-56 54
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 2e-56 54
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 2e-56 54
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 2e-56 54
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 2e-51 53
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 1e-47 53
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 2e-55 53
CDCE8392_1774 YP_005134308.1 transposase-like protein Not tested Not named Protein 1e-36 50
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 5e-49 48
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 3e-35 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NOCYR_2864 YP_005264269.1 transposase VFG1602 Protein 1e-55 53